Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0273 ATGGCTGGGATTTGTTGTGGTGTTGTTGAAGGAGAAACCCCAACTCCAATTGCCTCATCCTCACTCCGACGACGATGTTTGGACCTGTTCCCTTTGAAATGCATCGCCGACATGGCGGTTCCGCCGATGGAAGGTAATAACCGTAAACGTCAGAAGCTAGATTCACAACCACAGCCACGTGAGTGTCATAACACGGTCCAAAATCGTGAATCTATTCTTACTACACCTAATAAGAACGAAGAGCAAAACAAGGAGACCAAGGGACACAACCAAATAGTTGTTGTTTCGGAAATTCCTACGTTGGACTCAACAGAGTTAGAAAACGAGGTTGTGGTAGAGGAGTATCCAAAGTACGGAGTCACATCGGTTTGTGGCAGAAGAAGGGAAATGGAAGATGCTGTTTCAGTGCATCCATCTTTCTACTCAAAAGACAGTAATACACAAAATCAAGATCAGAAGAGTTTCCATTTCTTCGGAGTCTATGACGGTCACGGATGTTCTCACGTAGCAACGATGTGCAAAGAAAGGCTACATGGTATCGTGAAAGAAGAGATTGAAAAAACAGATGAGAATTTAGATTGGAAATCCACCTTGGAACATAGCTTCGATCGAATGGACAAGGAAGTGCAGGGATGGACCCACACCAAGCACACATGCATTTGCAAATGCAACCTCCACACTCCCCACTCTGACGCCGTCGGATCCACCGCCGTCACCGCCGTCCTCACGCCAGAGAAGTTAGTTGTCGCTAACTGCGGTGACTCACGCGCCGTTCTCTGCCGTAACGGCGTTGCCATCCCCCTCTCTTCAGATCACAAGCCTGACCGACCCGACGAGTTGGTTCGTGTTGAAGCCGCGGGAGGGCGCGTGATCTATTGGGACGGTGCTAGAGTGCTTGGTGTACTTGCCATGTCTAGAGCGATAGGTGACAATTATTTAAAGCCGTACGTAATTTCAGAACCGGAGGTAACGGTAACGGAACGGTGTGACGAAGATGAATGTTTGATACTAGCGAGTGATGGGCTTTGGGATGTGGTGTCAAACGACACCGCATGCGGGGTGGTTCGGACATGTTTGGAGGCGCAGCGGAAGACGGTGTCGCCGCCAGGTTCTCCGAGAAGTTTGATGACGGCGGAGGGGTCTGATAAGGCATGTTCCGATGCGTCCATTCTGCTGACAAAGTTGGCTTTGGCGAGGCACAGCTCAGATAATGTGAGCGTGGTGGTAGTTGATTTGAGGAGAGATAAACGTCAACATCATCATCAAACAACAACAAAAGCGTGA 1284 0.4914 MAGICCGVVEGETPTPIASSSLRRRCLDLFPLKCIADMAVPPMEGNNRKRQKLDSQPQPRECHNTVQNRESILTTPNKNEEQNKETKGHNQIVVVSEIPTLDSTELENEVVVEEYPKYGVTSVCGRRREMEDAVSVHPSFYSKDSNTQNQDQKSFHFFGVYDGHGCSHVATMCKERLHGIVKEEIEKTDENLDWKSTLEHSFDRMDKEVQGWTHTKHTCICKCNLHTPHSDAVGSTAVTAVLTPEKLVVANCGDSRAVLCRNGVAIPLSSDHKPDRPDELVRVEAAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTVTERCDEDECLILASDGLWDVVSNDTACGVVRTCLEAQRKTVSPPGSPRSLMTAEGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRDKRQHHHQTTTKA* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0273 427 Pfam Protein phosphatase 2C 117 404 IPR001932 -
Lan11g0273 427 MobiDBLite consensus disorder prediction 67 90 - -
Lan11g0273 427 Gene3D - 106 422 IPR036457 -
Lan11g0273 427 ProSiteProfiles PPM-type phosphatase domain profile. 117 412 IPR001932 -
Lan11g0273 427 MobiDBLite consensus disorder prediction 43 62 - -
Lan11g0273 427 ProSitePatterns PPM-type phosphatase domain signature. 157 165 IPR000222 GO:0043169
Lan11g0273 427 CDD PP2Cc 117 360 IPR001932 -
Lan11g0273 427 PANTHER ALPHABET, ISOFORM E-RELATED 31 416 - -
Lan11g0273 427 SUPERFAMILY PP2C-like 113 413 IPR036457 -
Lan11g0273 427 SMART PP2C_4 107 410 IPR001932 -
Lan11g0273 427 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 31 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0273 Lan-Chr11 1787657 1789728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0273 90 419 PP2C-type Phosphatase Gene Family AT1G07430 58.523 6.45e-141 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0273 K14497 - gmx:100776356 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0273 11 1787657 1789728 Lan11g0273 11 1787657 1789728 ECH
Lan11g0273 11 1787657 1789728 Lan9g1303 9 20314559 20316356 LSH
Lan4g0178 4 2901578 2903503 Lan11g0273 11 1787657 1789728 PCT
Lan11g0273 11 1787657 1789728 Lan4g0178 4 2901578 2903503 PCT