Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0268 ATGAGTACACAACAACAACAACAACAACAACCACAACAAGTGATTGATGAAGCGGTGCTGGACGACATTATCCGGCGACTCACGGAGGTCCGGTTGGCCCGACCAGGGAAGCAGGTTCAGCTCTCCGAATCTGAGATCAAGCAACTTTGCCTCGCTTCTAGAGATATCTTCCTTCAACAACCCAATTTGCTCGAACTCGAAGCCCCCATTAAGATTTGTGGGGACATTCATGGACAGTACAGTGATTTGTTAAGGCTCTTTGAGTATGGTGGTTTACCTCCTAATGCTAATTACCTCTTTTTAGGAGACTATGTGGATCGTGGAAAGCAGAGCTTAGAAACCATATGTCTTTTGCTTTCCTATAAAATCAAATATCCTGAAAACTTTTTCCTCTTGAGAGGAAATCATGAGTGTGCTTCCATTAATAGAATATATGGATTTTATGATGAATGTAAGCGAAGGTTCAACGTTAGGCTTTGGAAAGCCTTTACAGATTGTTTTAACTGCCTTCCTGTGGCAGCCCTCATAGATGATAAAATATTGTGCATGCATGGTGGTCTTTCGCCTGAACTCACACACTTGGATGAAATCAGGAATCTGCCTCGTCCGGTTGCTATCCCAGACACTGGCTTGCTCTGTGATTTGCTTTGGTCGGATCCTGGTAGAGATGTGAAGGGTTGGGGCATGAATGACAGAGGAGTCTCCTTCACCTTTGGTCCTGATACGGTGGCTGAATTTTTGGCAAAGCATGGCTTGGACCTTGTTTGTCGTGCTCATCAGGTTGTAGAGGATGGGTATGAATTCTTCGCCGACCGGCAACTTGTTACGATATTTTCAGCTCCAAACTACTGTGGTGAATTTGACAACGCTGGTGCAATGATGAGCGTGGATGAAAACTTGATGTGCTCTTTCCAGATTCTCAAGCCTGCAGAGAAAAAAGCAAAGTTTGTGATGTCAAACAAAATGTGA 969 0.4417 MSTQQQQQQQPQQVIDEAVLDDIIRRLTEVRLARPGKQVQLSESEIKQLCLASRDIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPNANYLFLGDYVDRGKQSLETICLLLSYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDDKILCMHGGLSPELTHLDEIRNLPRPVAIPDTGLLCDLLWSDPGRDVKGWGMNDRGVSFTFGPDTVAEFLAKHGLDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDENLMCSFQILKPAEKKAKFVMSNKM* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0268 322 Gene3D - 12 320 IPR029052 -
Lan11g0268 322 Pfam Serine-threonine protein phosphatase N-terminal domain 20 67 IPR031675 -
Lan11g0268 322 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 13 315 - -
Lan11g0268 322 ProSitePatterns Serine/threonine specific protein phosphatases signature. 132 137 IPR006186 GO:0016787
Lan11g0268 322 SUPERFAMILY Metallo-dependent phosphatases 26 315 IPR029052 -
Lan11g0268 322 SMART pp2a_7 41 311 IPR006186 GO:0016787
Lan11g0268 322 CDD MPP_PP1_PPKL 19 309 - -
Lan11g0268 322 Pfam Calcineurin-like phosphoesterase 69 261 IPR004843 GO:0016787
Lan11g0268 322 PRINTS Serine/threonine phosphatase family signature 69 96 IPR006186 GO:0016787
Lan11g0268 322 PRINTS Serine/threonine phosphatase family signature 98 125 IPR006186 GO:0016787
Lan11g0268 322 PRINTS Serine/threonine phosphatase family signature 131 155 IPR006186 GO:0016787
Lan11g0268 322 PRINTS Serine/threonine phosphatase family signature 165 191 IPR006186 GO:0016787
Lan11g0268 322 PRINTS Serine/threonine phosphatase family signature 194 221 IPR006186 GO:0016787
Lan11g0268 322 PRINTS Serine/threonine phosphatase family signature 251 271 IPR006186 GO:0016787
Lan11g0268 322 PRINTS Serine/threonine phosphatase family signature 273 289 IPR006186 GO:0016787
Lan11g0268 322 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 13 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0268 Lan-Chr11 1752145 1757423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0268 48 257 Calmodulin-binding Proteins AT5G63870 31.873 2.06e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0268 K06269 - gmx:100807069 617.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1112 2 22407127 22412569 Lan11g0268 11 1752145 1757423 LSH