Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0267 ATGGCTCCTCTTTCTGAGGTCAACCACCTTTCACATCCATATATACATGGTGGGGATTTTTCTTCTTCATACTCAGAGAGAAAGTTTGGTGTAATGAAATGGCTTAGTAAGCTTTTCAAAGGTGGCTCCAATAGAGGGAAGGGTGGTCATAATCATCATCTACACGAGCCTGCAGAGGAAAACATGAGTTGGCGCGCTCCATCTATAGCATCGGATGATCCTGCTAGATCTCAGAAACAGAAAGATCTCGGCCATGCAATGGAACTTTCTTCAGCCGAAGATTTAAAGAGACCAAATGCCCATCAAGGATATGGATGGGGGACATACAACGATGAAGATTACTCAAAGGGTCTTCCTGATAGTTTGGGCTCTTCTGCATACCCTCCACATGCTCCTGCACCATATTATCCAAGGGATTATAGAATATGTGGCGGCTGCGACCGGGAGATAGTGCATGGAAATTGTTTGAGCTGCATGGATTCTTATTTTCATCCAGACTGTTTTCGCTGCCACTCTTGTTCTTACCCTATCACTGACCGTGAGTTTTCTTTGTCAGGGAAGCATCCATATCATAAGATCTGTTTTAAAGAGTTGACCCACCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTGTCAATTCTGCTGGCTTGATTGAGTATAGATGCCACCCTTTTTGGTCCCAAAAGTATTGTCCATCTCATGAATACGATAATACAGCTCGCTGCTGTAGTTGTGAAAGATTGGAGCCTCGGAATGTAAAATACTATAGGCTCGAAGATGGACGTAGTTTGTGCTTAGAGTGCATGGAATCTGCTATAATGGATACTGGTGATTGTCAACCTCTTTATCATTCTATCAGAGATTATTATGAAGGAATGCAAATGAGAATAGATCAACAAGTTCCCATGCTTCTGGTTGAAAGAGAAGCACTTAATGAAGCTATTGTTGGGGAGAAAAATGGTTTCCATCACTTGCCAGAAACAAGAGGCTCATGCCTTTCAGAAGAGCAGACTGTAACCAGTATACAGAGAAGACCGAGAATTGGAGGCCGTCGACTAATAGGGATGAGAACTCAACCTCACAAGCTGATCAGAAGAAGTGAAGTTACAGCAATTCTTGTTCTATATGGTCTTCCAAGGTTACTCACAGGTGCTATCCTTGCCCATGAGTTGATGCATGCTTGGTTACGCCTTAAAGGATACCGCAACCTTAATCCGGAAGTAGAAGAAGGCATTTGTCAAGTTCTTTCATACATGTGGCTTGAGTCAGAAGTAATACCAAACTTTCAAAACATGGGATCATCATACACAGCTTCTTCTTCCTCCTCCTCTTCAAAGAAAGGTGCAAAATCTCAAGTGGAAAATAAACTTGGTGAATTTTTCATGAATCAGATTGTTAATGATTCTTCCCCAGCATATGGTGATGGCTTTAGAGCTGCTAATGAAGCTGTTAAAAAATACGGCTTACGTCGTACTCTCGACCATATTCGTTTCACTGGTTTTTTCCCTATGTAA 1515 0.4185 MAPLSEVNHLSHPYIHGGDFSSSYSERKFGVMKWLSKLFKGGSNRGKGGHNHHLHEPAEENMSWRAPSIASDDPARSQKQKDLGHAMELSSAEDLKRPNAHQGYGWGTYNDEDYSKGLPDSLGSSAYPPHAPAPYYPRDYRICGGCDREIVHGNCLSCMDSYFHPDCFRCHSCSYPITDREFSLSGKHPYHKICFKELTHPKCEVCFQFIPVNSAGLIEYRCHPFWSQKYCPSHEYDNTARCCSCERLEPRNVKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMQMRIDQQVPMLLVEREALNEAIVGEKNGFHHLPETRGSCLSEEQTVTSIQRRPRIGGRRLIGMRTQPHKLIRRSEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYRNLNPEVEEGICQVLSYMWLESEVIPNFQNMGSSYTASSSSSSSKKGAKSQVENKLGEFFMNQIVNDSSPAYGDGFRAANEAVKKYGLRRTLDHIRFTGFFPM* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0267 504 MobiDBLite consensus disorder prediction 68 94 - -
Lan11g0267 504 CDD LIM_DA1 143 195 - -
Lan11g0267 504 ProSiteProfiles LIM domain profile. 141 201 IPR001781 -
Lan11g0267 504 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 135 168 - -
Lan11g0267 504 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 21 504 - -
Lan11g0267 504 ProSitePatterns LIM zinc-binding domain signature. 143 177 IPR001781 -
Lan11g0267 504 SMART lim_4 142 194 IPR001781 -
Lan11g0267 504 MobiDBLite consensus disorder prediction 75 94 - -
Lan11g0267 504 PANTHER PROTEIN DA1-RELATED 2 21 504 IPR045218 -
Lan11g0267 504 Pfam Protein DA1 292 498 IPR022087 -
Lan11g0267 504 Pfam LIM domain 143 196 IPR001781 -
Lan11g0267 504 Gene3D Cysteine Rich Protein 138 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0267 Lan-Chr11 1740505 1745352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan11g0267 DA1-like 8.6e-97 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0267 - - gmx:100784976 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0267 11 1740505 1745352 Lan11g0267 11 1740505 1745352 ECH
Lan11g0267 11 1740505 1745352 Lan9g1308 9 20354722 20358739 LSH