Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0248 ATGGCACCAAAAGCTACCAAGGCCGAGAAGAAAATCGCTTACGATGGAAAGCTTTGTGAGCTTCTTGATGAGTATACTCAAATCCTTGTTGTGAATGCTGACAATGTTGGTTCAAAACAGCTCCAGAATATTCGACAAGGTCTACGTGGCGACTCTGTTGTGCTTATGGGAAAAAACACTATGATGAAGCGTTCTGTTAGGATTCATGCTGAGAAAACTGGCAACCAGGCCTTCCTTAACCTTATCCCTCTTCTTATCGGAAATGTTGGATTGATTTTCACCAAGGGTGATTTGAAGGAGGTTAGCGAGGAAGTTGCGAAGTACAAGGTTGGAGCACCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTCCCTCCAGGCAACACTGGGCTCGATCCATCCCAGACATCTTTCTTCCAGGTGCTCAACATTCCCACCAAGATTAACAAGGGTACTGTTGAAATTATCACACCCGTGGAGCTCATTAAGAAGGGAGACAAGGTTGGCTCTTCTGAAGCTGCATTGCTTGCCAAGCTCGGCATAAGGCCATTCTCATACGGTCTTGTTGTCCTTTCTGTGTATGATAATGGTTCTGTGTTCAAACCTGAGGTGCTTGATCTCACTGAGGATGATCTCCTTGAGAAGTTCGCCATTGGAGTCTCCCAAGTTACTTCTCTGTCGCTAGCCATTTCATATCCAACCCTTGCTGCTGCACCTCACATGTTTATCAATGCCTATAAGAATGCTCTGGCTGTTGCAGTTGCAACAGAGTATTCTTTCCCCCAGGCAGATGAAGTTAAGGAGTACTTGAAGGATCCTAGCAAATTTGCTGCTGTAGCTGCTGCTGCCGCACCTGCTGCTGATACTGGAGCTGCACCAGCTGCTGCTGCCAAGGTGGAGAAAGAGGAAGAGCCAGCTGAAGAATCAGATGATGATATTGGTTTCGGTCTGTTTGATGAATAG 969 0.4634 MAPKATKAEKKIAYDGKLCELLDEYTQILVVNADNVGSKQLQNIRQGLRGDSVVLMGKNTMMKRSVRIHAEKTGNQAFLNLIPLLIGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQVTSLSLAISYPTLAAAPHMFINAYKNALAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADTGAAPAAAAKVEKEEEPAEESDDDIGFGLFDE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0248 322 PIRSF L10E 1 321 IPR030670 GO:0042254
Lan11g0248 322 Pfam 60s Acidic ribosomal protein 234 320 - -
Lan11g0248 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 321 - -
Lan11g0248 322 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Lan11g0248 322 Gene3D - 6 209 IPR043141 -
Lan11g0248 322 Pfam Ribosomal protein L10 8 108 IPR001790 -
Lan11g0248 322 CDD Ribosomal_P0_L10e 9 185 - -
Lan11g0248 322 Gene3D - 114 185 IPR043164 -
Lan11g0248 322 MobiDBLite consensus disorder prediction 294 322 - -
Lan11g0248 322 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Lan11g0248 322 MobiDBLite consensus disorder prediction 306 322 - -
Lan11g0248 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0248 Lan-Chr11 1589851 1591979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0248 1 320 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 84.062 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0248 K02941 - jre:108991896 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0248 11 1589851 1591979 Lan11g0248 11 1589851 1591979 ECH