Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0242 ATGGTGACAACTAAATCACCCTCCTCCGCCATCATCCTCACCGTCACCGCCGTCTTAACCTTCTCTTTGTTATTATCATTATGTGATGCTCTAGGCTCCGGCACCACCCTCGCTGTCAGTGACGCCTCCGCTACCGTCTGCGGCGTCGTGGCATCACAACCAACCCAACGCATTGAGTGCTACCGTAGCGGCTACGTTATCAATGTCGTACCCAACGTCTCATTTTCCGCCATCTCCGGCGGAAGAAAATACTTTTGCGGCCTCAGGTCCGGTAACTACAGCTTATTCTGCTGGGACACTGTTTCCTCCAATGTTACCTTCGAAAGTAGAAGACTTTACAACAATGACACTGTTCTATTTGAGAATCTCTCTGTTGGTGACACTCAAGTTTGCGCTACAATTGTTGGTGCTGGAACGGTGTCGTGTTGGAGAATCAATAGCGCGTTTGAATTGTCACCTTGGTATAATCACTTTGCTTCTATTTCATCTGGGTCTGGTTTTTCTTGTGGAATTGTGAAGAACAGTTCTCGAGTTTGGTGTTGGGGTAATGGGTCTATTGCTAGAAAGATAGAGAGTGAGTTTGGGAACATGTCTATGTTGAGTATTGTGGCGGGTGGCTCACATGTTTGTGGGTTGAATTCAAATGGGTTTTTGGTATGTAGAGGAAGTAACAATTTTGGTCAAATTGATGTTCCAAAAGGAGGGTCTTTTGAGTATTCTGGGTTGGCTCTTGGAGCTGAACATAGCTGTGCTATTAGGAGATGGAATGGTTCTGTTGTTTGTTGGGGTGGTAGGGGATTGTTCTCTGTTAATGTTACACAGGGTGTTTCTTTTGAGACCATTGTTTCTGGCTCCAATTTTACATGTGGATTGACAACAAACAATTTTTCTGTTATGTGTTGGGGCCCTGGTTGGTCTAATAGTGATGGTTATAGTTCTAGGTTTGAGCTTCCCTTGTCTCCTATTCTTCCCGGGCCTTGTGTTCAATCTTCTTGTAGTGATTGTGGTATATATCCCGGGTCTCAAATTTTGTGTTCTGGACAAGGTAACATTTGCAAGCCTCGGCCATGTTCGCCTCAAATGCCAGTCTCAGCGGTACCACTGGCTTTACCACCATCCCAGGCTTCTTCTCCTTTGCGGTCAAAGGCGTTGACATCTGGCTTGTTGGTACTTGCCATTGTTGGATCAGTGGGAGCTGTTTCTGGCATTTGCACCTTAATTTATTGCTTGTGGACTGGTGTTTGTTTGGGGAAGAAGAAAGTTTATAATTCTGTGCAGCCAACTATTACTAGAGGTGGCAGTTCAAATGGTGGTGTTAATAGGCTGGCTTCGAGATCATCCACCATTATGCGTCAGGGCTCAAGAATAATGCGGCGCCAGAGGAGTGGAACATCATCAATGAAACTTCCAGACAGGGCAGAGGAGTTCACTCTGGCAGAGCTTGTTGCTGCCACCAACAATTTCTCTCTTGAGAACAAGATTGGTGCTGGAAGCTATGGTGTTGTGTATAAATGCAAACTCGCTGATGGTCGCGAGGTAGCAATCAAGAGGGGTGACACTGGTACCAAGACGAAAAAGTTTCAAGAGAAAGAGTGTGCATTTGAGGCGGAATTGGGGTTCTTGTCCCGTCTACACCACAAGCATTTGGTTAGGTTAGTTGGGTACTGCCAAGAGAAAGATGAGAGGCTCTTGGTGTATGAATACATGAAGAATGGGGCACTATATGACCATTTGCATGACAAAAACAATGTGGACAGGAATAGTAGTGCCTTGAATTCTTGGAGAATGAGGATCAGAATTGCATTAGATGCTTCGCGAGGAATCGAATATCTTCATGATTATGCAGTTCCATCTATAATTCACCGAGATATCAAGTCCTCTAACATTCTGATTGATGCAAATTGGACGGCAAGAGTATCTGATTTTGGGCTGTCACTGATGAGTCCGGATTCAGGCCATGATTACCGGCCTACGAAGGCAGCCGGAACGGTTGGATACATTGATCCTGAGTATTATGGTCTAAATGTTTTGACATCAAAGAGTGACGTCTATGGACTTGGAGTGGTACTGCTAGAACTCTTGACAGGAAAGAGAGCTATATTCAAGCATGGTGAGAATGGAGGCACCCCTATGAGTGTTGTAGATTATGCTGTGCCTGCAATCATGGGAGGAGAATTGTTGCAGATTTTGGACCGGAGGGTTGAACCGCCGCAGTTGAATGAAACAGAAGCAGTGGAGCTGGTGGCCTATACCGCAATGCATTGTGTAAATTTGGAAGGGAAGGATAGACCAACAATGGCTGACATTGTGGCCAATTTGGAGCGTGCTTTGACTCTTTGTGATTCTAGTCATGGCAGCATTTCTAGCGGTATAATCTCTAATGTATCAGACTGA 2394 0.4528 MVTTKSPSSAIILTVTAVLTFSLLLSLCDALGSGTTLAVSDASATVCGVVASQPTQRIECYRSGYVINVVPNVSFSAISGGRKYFCGLRSGNYSLFCWDTVSSNVTFESRRLYNNDTVLFENLSVGDTQVCATIVGAGTVSCWRINSAFELSPWYNHFASISSGSGFSCGIVKNSSRVWCWGNGSIARKIESEFGNMSMLSIVAGGSHVCGLNSNGFLVCRGSNNFGQIDVPKGGSFEYSGLALGAEHSCAIRRWNGSVVCWGGRGLFSVNVTQGVSFETIVSGSNFTCGLTTNNFSVMCWGPGWSNSDGYSSRFELPLSPILPGPCVQSSCSDCGIYPGSQILCSGQGNICKPRPCSPQMPVSAVPLALPPSQASSPLRSKALTSGLLVLAIVGSVGAVSGICTLIYCLWTGVCLGKKKVYNSVQPTITRGGSSNGGVNRLASRSSTIMRQGSRIMRRQRSGTSSMKLPDRAEEFTLAELVAATNNFSLENKIGAGSYGVVYKCKLADGREVAIKRGDTGTKTKKFQEKECAFEAELGFLSRLHHKHLVRLVGYCQEKDERLLVYEYMKNGALYDHLHDKNNVDRNSSALNSWRMRIRIALDASRGIEYLHDYAVPSIIHRDIKSSNILIDANWTARVSDFGLSLMSPDSGHDYRPTKAAGTVGYIDPEYYGLNVLTSKSDVYGLGVVLLELLTGKRAIFKHGENGGTPMSVVDYAVPAIMGGELLQILDRRVEPPQLNETEAVELVAYTAMHCVNLEGKDRPTMADIVANLERALTLCDSSHGSISSGIISNVSD* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0242 797 Pfam Protein kinase domain 489 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0242 797 Gene3D - 29 192 IPR009091 -
Lan11g0242 797 Gene3D - 193 351 IPR009091 -
Lan11g0242 797 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 7 787 - -
Lan11g0242 797 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 7 787 IPR044815 GO:0004674
Lan11g0242 797 ProSiteProfiles Protein kinase domain profile. 488 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0242 797 SUPERFAMILY RCC1/BLIP-II 66 307 IPR009091 -
Lan11g0242 797 SUPERFAMILY Protein kinase-like (PK-like) 465 773 IPR011009 -
Lan11g0242 797 ProSitePatterns Protein kinases ATP-binding region signature. 494 516 IPR017441 GO:0005524
Lan11g0242 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lan11g0242 797 Gene3D Phosphorylase Kinase; domain 1 448 568 - -
Lan11g0242 797 Gene3D Transferase(Phosphotransferase) domain 1 569 786 - -
Lan11g0242 797 SMART serkin_6 488 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0242 Lan-Chr11 1544910 1547972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0242 13 797 Receptor kinase-like Gene Family AT3G55950 59.729 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan11g0242 Pkinase 6.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0242 - - gmx:100782916 1191.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0242 11 1544910 1547972 Lan11g0242 11 1544910 1547972 ECH
Lan2g1141 2 22653710 22656564 Lan11g0242 11 1544910 1547972 LSH
Lan11g0242 11 1544910 1547972 Lan9g1336 9 20544886 20547584 LSH
Lan15g0114 15 815038 817688 Lan11g0242 11 1544910 1547972 PCT
Lan11g0242 11 1544910 1547972 Lan15g0114 15 815038 817688 PCT