LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan11g0235	ATGAAAACCATGATGAGGGGATATGAACCTCGTTCAACCTCTTCTTGTGCAGCCTGCAAGTTCTTGAAGAGAAGATGCACACCAACTTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTCGCAAAGGTGCACAAAGTATTTGGAGCCAGCAATGTGAGCAAGATCCTTATTGAAGTGCCAGAAGAGCAGAGAGAGGATACTGTGAATTCACTTGCTTATGAAGCAGAAGCAAGGCTTAAGGACCCTGTTTATGGAGTCATTGGTGCCATAGCTTTATTGCAAAGGAAGATGATGGAGCTTCAACATGACCTTGCTATTGCTAAGGATCGTCTTGCTCGTTATGCTGCTGCAGCTACTACAACTGCACCTGATTTCTATAATAACCATGTTAGTTTGCCACCCTTTCCTGAATTCTACACTTGCACTGATTTCAATGACAGCTTTTGCCATAGTTCTTCATCTCCAACCCCTTCATTCAGCCGACATGAAATAACAGTGGATGATTTCGTTCAAATTCCATATATATTTTAA	543	0.4162	MKTMMRGYEPRSTSSCAACKFLKRRCTPTCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLKDPVYGVIGAIALLQRKMMELQHDLAIAKDRLARYAAAATTTAPDFYNNHVSLPPFPEFYTCTDFNDSFCHSSSSPTPSFSRHEITVDDFVQIPYIF*	181

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan11g0235	180	ProSiteProfiles	LOB domain profile.	14	115	IPR004883	-
	Lan11g0235	180	Coils	Coil	94	121	-	-
	Lan11g0235	180	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	5	159	-	-
	Lan11g0235	180	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 21	5	159	-	-
	Lan11g0235	180	Pfam	Lateral organ boundaries (LOB) domain	15	112	IPR004883	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan11g0235	Lan-Chr11	1493361	1494110	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan11g0235	5	120	AS2 family	AT3G11090	78.448	6.42e-65	195

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Lan11g0235		LOB	3.6e-37	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan11g0235	-		-	gmx:100777635	264.618

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan11g0235	11	1493361	1494110	Lan11g0235	11	1493361	1494110	ECH
	Lan11g0235	11	1493361	1494110	Lan9g1345	9	20603565	20604329	LSH