Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0230 ATGTGTGTATCCTTTGTTTTTTGTTCCACTAACTTCAACCTTTTAAAAGAGTCTTTAAGTTTTCAAAATCAAATGGGTGGTAATTCCCCATGTGCCTCATGCAAACTTCTGAGACGCCGTTGCACCAAAGATTGCACTTTTGCTCCTTATTTCCCTTCAGATGACCCTCAAAAGTTCGCCATAGTTCACAAGGTTTTTGGTGCTAGCAACGTTAGCAAAATGCTGCAGGAAATTCCAGTTCAGCAGAGAGCAGATGCAGTGAGTAGTCTAGTGTATGAGGCAAATGCAAGAGTTAGGGACCCTGTGTATGGTTGTGTTGGAGCAATATCATATCTGCAAAATCAAGTTTCTGAGCTTCAGATGCAGCTTGCAGTTGCTCAAGCAGAGATATTATGCATCCAGATGCAACATGACCCAGTAGTCATGCCAACCCCAGACATCATTGACTCTGATCAGAAATCTTACTTTCTCCAAAATGAATTCCCTCAGTACCTTAATTTTGGATCTTCTACTAATGTAATTCATGATTCTCTCAAGAGGGAGAACATTTTTGGACATGACATGGTTTCTTGA 573 0.4066 MCVSFVFCSTNFNLLKESLSFQNQMGGNSPCASCKLLRRRCTKDCTFAPYFPSDDPQKFAIVHKVFGASNVSKMLQEIPVQQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHDPVVMPTPDIIDSDQKSYFLQNEFPQYLNFGSSTNVIHDSLKRENIFGHDMVS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0230 190 ProSiteProfiles LOB domain profile. 29 130 IPR004883 -
Lan11g0230 190 Pfam Lateral organ boundaries (LOB) domain 30 127 IPR004883 -
Lan11g0230 190 Coils Coil 109 129 - -
Lan11g0230 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 25 183 - -
Lan11g0230 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 25 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0230 Lan-Chr11 1462844 1463874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0230 27 152 AS2 family AT2G30130 81.746 7.68e-74 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan11g0230 LOB 1.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0230 - - lang:109360574 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0230 11 1462844 1463874 Lan11g0230 11 1462844 1463874 ECH
Lan11g0230 11 1462844 1463874 Lan9g1347 9 20614068 20615109 LSH