Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0227 ATGGGAAAGAGCACATATGGAACTGTGTATAAGGCTACATTAGAAGATGGAAGTCAAGCTGCAGTGAAAAGATTGAGGGAAAAGATCACTAAAGGTCAGAGAGAATTCGAATCGGAAGTTAGTGTTCTAGGGAGAATTCGGCATCCAAATCTTTTGGCACTAAGAGCCTATTATTTGGGACCAAAAGGAGAAAAGCTTCTGGTCTTTGATTACATGCCTAAAGGAAGCCTTGCTTCTTTCCTACATGCTCGCGGGTCCGAAACAATCATTGATTGGCCAACGAGGATGAAAATTGCGCAGGGCATGGCTCATGGCTTGTTTTACCTTCATTCCCATGAGAACATTGTACATGGGAACCTTACATCCAGCAATGTATTGCTAGATGAGAATACAAATGCAAAAATAGCCGATTTTAGTCTCGCTCGGTTAATGACAACTGGTGTTAACTCTAACGTGATTGCAACTGCCGGAGCCTTGGGATACCGAGCACCCGAACTCTCAAAGCTGAAGAAAGCCAACACAAAAACAGATGTATACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACAGGGAAGCCACCTGGTGAGGCTATGAATGGTGTGGATTTACCTCAGTGGGTTGCTTCCATTGTCAAAGAGGAGTGGACGAATGAGGTTTTCGACATCGAGTTGATGAGAGATGCATCGACAAATGGTGACGAGTTGCTAAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGCTCAGCAAGTTCTGCAGCAGCTAGAACATATTAGACCAGAGGCAGAGGTATCATCCAGTTCTGGTGATGATTTTGCAATACCTTCAACCACTGAATAA 864 0.4387 MGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGSETIIDWPTRMKIAQGMAHGLFYLHSHENIVHGNLTSSNVLLDENTNAKIADFSLARLMTTGVNSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDIELMRDASTNGDELLNTLKLALHCVDPSPSARPEAQQVLQQLEHIRPEAEVSSSSGDDFAIPSTTE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0227 287 CDD STKc_IRAK 1 266 - -
Lan11g0227 287 Gene3D Transferase(Phosphotransferase) domain 1 73 281 - -
Lan11g0227 287 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 279 - -
Lan11g0227 287 PIRSF ILK 1 278 - -
Lan11g0227 287 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 1 279 - -
Lan11g0227 287 Pfam Protein tyrosine and serine/threonine kinase 1 263 IPR001245 GO:0004672|GO:0006468
Lan11g0227 287 MobiDBLite consensus disorder prediction 266 287 - -
Lan11g0227 287 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0227 287 SUPERFAMILY Protein kinase-like (PK-like) 2 268 IPR011009 -
Lan11g0227 287 Gene3D Phosphorylase Kinase; domain 1 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0227 Lan-Chr11 1437470 1438637 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0227 1 268 Receptor kinase-like Gene Family AT3G51740 76.119 6.11e-148 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan11g0227 PK_Tyr_Ser-Thr 2.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0227 - - lang:109359395 568.155