Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0225 ATGGAGAACCAAACCATGTCTTCAACATCCTTTTATTACCAAAACCCATGTCAGATTTTGCACCATGTTTCTTATAATGTTATGGAGAGACACAAATGGAAGATTAAGACTGAAAACCATAACCTTTTTCATTTTTTCTGGTTGTTTTCCTTGGTTCAATGTCTTTTGCTTCTTATGCTCCCAGTGAAGCCAGTGTTGGGTGAAGAGCATTGGGATGGTGTGGTTGTGACACAGTCAAACTTGTTGGCACTTCAAGCATTCAAGCAAGAGTTGGTTGATCCAAAAGGCTTCTTGAGAACATGGAATGACAATGGCTATGGAGCTTGTAATGGAAGTTGGGTTGGTATCAAGTGTGCTCATGGTCATGTTATTGTAATCCAACTTCCATGGAAGGGGTTAAAGGGCCATATCACTAATAGGGTTGGTCAACTTCAAGGGCTTAGAAAGCTCAGTCTTCATGATAACCAAATAGGTGGTTCAATCCCTTCAGCTTTAGGACTTCTTCCTAATCTGAGAGGGGTTCAACTTTTCAACAATATGTTCACTGGTTCAATCCCTTCTTCTTTAGGTTTCTGTCCTTTACTTCAGTCCTTAGATCTCAGTAACAACTTGCTCAAAGGCACAATCCCTGGTAGCCTTGGCAATTCCACTAAGCTTTATTGGCTTAACTTGAGCTTCAATTCATTATCTGGTCCAATACCATCTACTTTATCACACTCAGCTTCTCTTACATTTCTTTATCTTCAACACAATAATCTCTCTGGCTCTATTCCTAACTCATGGGGTGGTAGCCTAATCAGAGAGATTTCTCTTAGTCATAATCAGTTTAGTGGAGCAATACCTAATGAAATAGGAAGCCTTTCTAGGCTTAGGACAATAGATTTTTCTAATAATGCCTTCAATGGAAGCTTACCTGAAACACTCTCTAATTTAACCTCACTCACTCTATTCAATGTAGAGAACAACCACCTTGGAAATAAAATTCCAGAAGCTTTAGGGAAATTACACAACCTTTCTGTTCTGATTTTGAGCAGGAACCAATTTAGTGGCCACATTCCTCAAATCATTGGAAACATTTCTACCCTTACACAGCTTGATTTGTCACTGAATAATCTCGATGGAGAAATTCCGGTCTCTTTTAACAACCTAAGTGATCTTAATTTCTTCAATGTTTCTTATAACAACCTCTCTGGTCCAGTTCCCACTCTACTTGCCAAAAAATTTAACTCAAGCTCATTTGCAGGAAATATTCAATTATGTGGGTTCAGCCCTTCAACTCCATGCCCTTCAGAAGCACCTTCTGAAGGGCAAGGAGTCCTATCGCCACATCCTGAGAAATCAAAACATCGAAACCATAAGAAGTTAGGTACCAAAGACATAATTCTCATAGCTGCAGGAGTACTCTTGGCAGTGGTTATAACTCTATGCTGCATACTGATCTTCTGTCTGTTCAGAAGAAGGTCGGCATCAAACACTGAGAGTGGCCAGGCCACAGGGAGAGCCGCTTCTACCAGGACTCAAAAAGGAGTCCCTCCTGCCGCTGGTGAAGTTGAAGCAGGTGGCGACAATGGCGGGAAACTAGTCCATTTTGATGGACCACTGGCTTTTACAGCTGATGATCTCTTGTGTGCAACAGCAGAAATAATGGGAAAGAGCACATATGGAACTGTGTATAAGGCTACATTAGAAGATGGAAGTCAAGCTGCAGTGAAAAGATTGAGGGAAAAGATCACTAAAGGTCAGAGAGAATTCGAATCGGAAGTTAGTGTTCTAGGGAGAATTCGGCATCCAAATCTTTTGGCACTAAGAGCCTATTATTTGGGACCAAAAGGAGAAAAGCTTCTGGTCTTTGATTACATGCCTAAAGGAAGCCTTGCTTCTTTCCTACATGCTCGCGGGTCCGAAACAATCATTGATTGGCCAACGAGGATGAAAATTGCGCAGGGCATGGCTCATGGCTTGTTTTACCTTCATTCCCATGAGAACATTGTACATGGGAACCTTACATCCAGCAATGTATTGCTAGATGAGAATACAAATGCAAAAATAGCCGATTTTAGTCTCGCTCGGTTAATGACAACTGGTGTTAACTCTAACGTGATTGCAACTGCCGGAGCCTTGGGATACCGAGCACCCGAACTCTCAAAGCTGAAGAAAGCCAACACAAAAACAGATGTATACAGTCTTGGTGTTATCTTGTTAGAACTCCTAACAGGGAAGCCACCTGGTGAGGCTATGAATGGTGTGGATTTACCTCAGTGGGTTGCTTCCATTGTCAAAGAGGAGTGGACGAATGAGGTTTTCGACATCGAGTTGATGAGAGATGCATCGACAAATGGTGACGAGTTGCTAAACACTTTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGCTCAGCAAGTTCTGCAGCAGCTAGAACATATTAGACCAGAGGCAGAGGTATCATCCAGTTCTGGTGATGATTTTGCAATACCTTCAACCACTGAATAA 2508 0.4195 MENQTMSSTSFYYQNPCQILHHVSYNVMERHKWKIKTENHNLFHFFWLFSLVQCLLLLMLPVKPVLGEEHWDGVVVTQSNLLALQAFKQELVDPKGFLRTWNDNGYGACNGSWVGIKCAHGHVIVIQLPWKGLKGHITNRVGQLQGLRKLSLHDNQIGGSIPSALGLLPNLRGVQLFNNMFTGSIPSSLGFCPLLQSLDLSNNLLKGTIPGSLGNSTKLYWLNLSFNSLSGPIPSTLSHSASLTFLYLQHNNLSGSIPNSWGGSLIREISLSHNQFSGAIPNEIGSLSRLRTIDFSNNAFNGSLPETLSNLTSLTLFNVENNHLGNKIPEALGKLHNLSVLILSRNQFSGHIPQIIGNISTLTQLDLSLNNLDGEIPVSFNNLSDLNFFNVSYNNLSGPVPTLLAKKFNSSSFAGNIQLCGFSPSTPCPSEAPSEGQGVLSPHPEKSKHRNHKKLGTKDIILIAAGVLLAVVITLCCILIFCLFRRRSASNTESGQATGRAASTRTQKGVPPAAGEVEAGGDNGGKLVHFDGPLAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQAAVKRLREKITKGQREFESEVSVLGRIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGSETIIDWPTRMKIAQGMAHGLFYLHSHENIVHGNLTSSNVLLDENTNAKIADFSLARLMTTGVNSNVIATAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKPPGEAMNGVDLPQWVASIVKEEWTNEVFDIELMRDASTNGDELLNTLKLALHCVDPSPSARPEAQQVLQQLEHIRPEAEVSSSSGDDFAIPSTTE* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0225 835 CDD STKc_IRAK 549 814 - -
Lan11g0225 835 MobiDBLite consensus disorder prediction 493 521 - -
Lan11g0225 835 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 827 - -
Lan11g0225 835 Gene3D Ribonuclease Inhibitor 237 325 IPR032675 -
Lan11g0225 835 Gene3D Ribonuclease Inhibitor 326 428 IPR032675 -
Lan11g0225 835 SUPERFAMILY Protein kinase-like (PK-like) 547 816 IPR011009 -
Lan11g0225 835 Pfam Protein tyrosine and serine/threonine kinase 546 811 IPR001245 GO:0004672|GO:0006468
Lan11g0225 835 SUPERFAMILY L domain-like 109 408 - -
Lan11g0225 835 Gene3D Phosphorylase Kinase; domain 1 549 620 - -
Lan11g0225 835 MobiDBLite consensus disorder prediction 814 835 - -
Lan11g0225 835 ProSiteProfiles Protein kinase domain profile. 543 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0225 835 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 29 827 - -
Lan11g0225 835 Pfam Leucine rich repeat N-terminal domain 81 118 IPR013210 -
Lan11g0225 835 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Lan11g0225 835 MobiDBLite consensus disorder prediction 428 452 - -
Lan11g0225 835 Gene3D Ribonuclease Inhibitor 78 236 IPR032675 -
Lan11g0225 835 Gene3D Transferase(Phosphotransferase) domain 1 621 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0225 Lan-Chr11 1424532 1427355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0225 71 816 Receptor kinase-like Gene Family AT3G51740 61.886 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan11g0225 PK_Tyr_Ser-Thr 1.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0225 - - gmx:100811174 1245.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0225 11 1424532 1427355 Lan11g0225 11 1424532 1427355 ECH
Lan2g1160 2 22836506 22839639 Lan11g0225 11 1424532 1427355 LSH
Lan15g0094 15 658793 662093 Lan11g0225 11 1424532 1427355 PCT
Lan11g0225 11 1424532 1427355 Lan15g0094 15 658793 662093 PCT