Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0218 ATGGCTTCGTTTTGTTCTAGCTTAATGATTAGTTTGGCTCTCTTTGTCCTTGTGTTGGGGAGTGCCAATGCATCACTTTCAAAAGACTTCTACTATAGTTCCTGTCCAAAATTATTTGACACTGTGAAATGCACAGTGAAATCTGCTATATCAAAAGAGACCCGCATGGGTGCTTCTCTTCTTCGTCTCTTCTTCCATGATTGCTTTGTTAATGGATGTGATGGTTCAATTCTACTAGATGATACATCAAGCTTCACCGGGGAGAAGAATGCAAACCCAAATAGGAACTCAGTGCGTGGATTCCAAGTTATTGACAACATAAAATCAGCTCTAGAAAAAGTGTGCCCAGGCGTTGTCTCTTGCGCTGATATCCTTGCCATTGCTGCTAGAGACTCAGTTTCCATACTTGGAGGGTCAAGTTGGGATGTGAAACTTGGAAGAAGAGATGCTAAGACAGCTAGTCAATCTGCTGCAAACAATGGTATCCCTCCACCAACTTCAAACCTTAACCAACTCATCTCAAGATTCAATGCTCTTGGACTTTCCACCAAAGACTTGGTAGCATTGTCTGGGGGTCACACTATTGGACAAGCAAGGTGCACCACCTTCAGAGCCCACATATACAATGAGACTAACAACATTGATAACTCCTTAGCTAGCATGAGACAATCTAACTGTCCTAGGGCATCAGGTTTTGGAGACAACAATCTAGCACCCCTTGATCTTCAAACACCAACATCATTTGACAACAAATACTTCAATGATCTGATTCAGAAAAAGGGTCTACTCCACTCTGATCAGCAACTCTTCAATGGAGGCTCCACTGACACCATAGTGCATGGATACACCACTAACCCAACCTCTTTTTACTCTGATTTTGTCAATGCTATGATCAAGATGGGAGATATTAGTCCCCTCACTGGCTCTAATGGAGAGATAAGAAATAATTGTAGGAGGGTTAACTAA 966 0.4213 MASFCSSLMISLALFVLVLGSANASLSKDFYYSSCPKLFDTVKCTVKSAISKETRMGASLLRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSVRGFQVIDNIKSALEKVCPGVVSCADILAIAARDSVSILGGSSWDVKLGRRDAKTASQSAANNGIPPPTSNLNQLISRFNALGLSTKDLVALSGGHTIGQARCTTFRAHIYNETNNIDNSLASMRQSNCPRASGFGDNNLAPLDLQTPTSFDNKYFNDLIQKKGLLHSDQQLFNGGSTDTIVHGYTTNPTSFYSDFVNAMIKMGDISPLTGSNGEIRNNCRRVN* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0218 321 Gene3D Peroxidase, domain 2 163 300 - -
Lan11g0218 321 Gene3D - 29 321 - -
Lan11g0218 321 PANTHER PEROXIDASE 10 320 - -
Lan11g0218 321 Pfam Peroxidase 43 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PANTHER PEROXIDASE 72-RELATED 10 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 SUPERFAMILY Heme-dependent peroxidases 26 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 CDD secretory_peroxidase 26 320 IPR033905 GO:0004601|GO:0042744
Lan11g0218 321 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Lan11g0218 321 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan11g0218 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Lan11g0218 321 ProSiteProfiles Plant heme peroxidase family profile. 25 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0218 Lan-Chr11 1396565 1398336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0218 24 321 Peroxidase AT5G05340 72.819 2.74e-162 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0218 K00430 - gmx:100803637 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1169 2 22871106 22872847 Lan11g0218 11 1396565 1398336 LSH