Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0189 ATGAATGGTTCTGAAGTTGCAGCAGCAATGTCGGATGACATGCTGATGCAATTCTCTTCAAACTCTTCGAACCAATCGGATCAGTCTCTGCCTACAAAGATTGCAAAGCTGGAAGCTCGAATGGTGGGTCGGGGTTCCTCCAATGCTTCTCAGCAATCAACTCGGTCCCCTGCTCCTTCTCCGGCTTCGAAATTTGCAGGAGTTGCTGAGAATGTGGTTGAACCATCCACTTCAAGTGATTCTGATGACGATAATGGTGGGGAATTCTTAATACAAGCCAACACACAGAAGCGTCAAAGACATGAAGAACATGCCAGCTCCAATGTTTTTGAGCGTGCTGAGGTTGTTACTGATGGAAGACAAACTAGTTTGGAGGCTGCAGAGACAAAAACTAATGTTGATGTGAATAAAAAGAAACCTGGCCGTGGAAGAGGCGGCTCTGGTTCAAGTAGAGGCCGTGGTTCCAGAGTTAATGATCAGACCAGAACACCGATTCCTCATTCATCTGTTTTGGCTTTAAATGGTCAGATTGATAATGATGGAAGACTCAAAGATCAGTTTCTTAATGATAACTATGCTTCATTAGAGGAAGTGGTTGCATCTTTACGTGCAAAAGTTGTTGCAATGGAGGAGGACTTGCGTAAATCAAAACAAGATACCTCTGACTATCAGAATCTTTGTCGGCAGTTAGAAAAGGAACTGAAAGATGTAACAGATCATGAACAACAAATGAAGCCTAAGAGAACAAAGATAATATCTGATTTGCTGATATCAGTTTCGAAGGCTGAGAGACAAGAAGCAAGGCTGAAAGTACGACAAGATTCTTTGAGACTTGGAAATATTGGTGTAATCAGAGCTGGAACAGTCATATCTGAGACCTGGGAAGATGGTCAAGCATTGAAGGATCTGAATGCCCAACTTAGACAACTAATAGAAACAAAAGAAGCAATTGAACGGCAGCGCAAGTTATTTAAGAAAAGACAACCTGATAAGGGAGATGGTACAGATGCAGAGGCTGGATTACCGGAAGATGTTCTCATTCACGATGAAATCTACAAGTCTCGACTAGCTAGTATTAAACGAGAAGAAGAACTTATTCTGCGGGAGAGGGATCGCTACGAAATAGAGAAGGGGAAATTGATAAGGGAAATGAAACGCATACGGGATGAAGATGGTTCACGGTTTAACAACTTTCAGATTCTTAATCATCGTTATGCCCTTCTAAATCTTCTTGGAAAGGGAGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCCTGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATACGACATGCAATTCGAGAATACAATATTCACAAGACCCTTGTGCATCATCACATTGTTCGTTTATGGGACATCTTTGAGATTGATCACAATACATTCTGCACTGTTCTGGAGTACTGCAGTGGGAAGGATCTTGATGGTGTCCTTAAAGCAACACCTATATTACCTGAGAGGGAAGCTAGGGTCATTCTAGTTCAGGTTTTTCAAGGTCTTCTTTACATGAATAAAAGGACACAGAAGATTATCCACTATGATTTAAAGCCTGGAAACGTTCTGTTTGATGAGTTTGGCGTTGCCAAAGTTACTGATTTTGGTCTTAGCAAGATAGTGGAGGATGATGTCGGATCCCAGGGTATGGAACTTACATCTCAGGGCGCTGGAACATATTGGTATTTGCCCCCGGAATGCTTTGAGCTCAACAAGACTCCTCTTATCTCATCAAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTTTATCAAATGCTCTTCGGAAGACGACCCTTTGGGCATGACCAAACACAAGAGAGAATACTTCGCGAAGACACTATCATCAAGGCACGCAGAGTCGAATTTCCTTCTAGGCCTACTGTTTCTAATGAGGCAAAGGATTTGATTAGACGGTGCCTAACATATAATCAAGCTGAGAGACCAGATGTGTTAACCATTGCTCAAGATCCATATCTCACTTACTCAAAGAAGTAA 2052 0.4196 MNGSEVAAAMSDDMLMQFSSNSSNQSDQSLPTKIAKLEARMVGRGSSNASQQSTRSPAPSPASKFAGVAENVVEPSTSSDSDDDNGGEFLIQANTQKRQRHEEHASSNVFERAEVVTDGRQTSLEAAETKTNVDVNKKKPGRGRGGSGSSRGRGSRVNDQTRTPIPHSSVLALNGQIDNDGRLKDQFLNDNYASLEEVVASLRAKVVAMEEDLRKSKQDTSDYQNLCRQLEKELKDVTDHEQQMKPKRTKIISDLLISVSKAERQEARLKVRQDSLRLGNIGVIRAGTVISETWEDGQALKDLNAQLRQLIETKEAIERQRKLFKKRQPDKGDGTDAEAGLPEDVLIHDEIYKSRLASIKREEELILRERDRYEIEKGKLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDGVLKATPILPEREARVILVQVFQGLLYMNKRTQKIIHYDLKPGNVLFDEFGVAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELNKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQTQERILREDTIIKARRVEFPSRPTVSNEAKDLIRRCLTYNQAERPDVLTIAQDPYLTYSKK* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0189 683 SMART serkin_6 405 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0189 683 PANTHER MIXED LINEAGE PROTEIN KINASE 10 683 - -
Lan11g0189 683 ProSiteProfiles Protein kinase domain profile. 405 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0189 683 Coils Coil 356 390 - -
Lan11g0189 683 SUPERFAMILY Protein kinase-like (PK-like) 397 679 IPR011009 -
Lan11g0189 683 MobiDBLite consensus disorder prediction 151 168 - -
Lan11g0189 683 MobiDBLite consensus disorder prediction 44 60 - -
Lan11g0189 683 Pfam Protein kinase domain 406 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0189 683 ProSitePatterns Protein kinases ATP-binding region signature. 411 434 IPR017441 GO:0005524
Lan11g0189 683 MobiDBLite consensus disorder prediction 95 109 - -
Lan11g0189 683 MobiDBLite consensus disorder prediction 72 94 - -
Lan11g0189 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Lan11g0189 683 PANTHER BNAC09G36930D PROTEIN 10 683 - -
Lan11g0189 683 Coils Coil 192 243 - -
Lan11g0189 683 MobiDBLite consensus disorder prediction 17 32 - -
Lan11g0189 683 Gene3D Transferase(Phosphotransferase) domain 1 396 683 - -
Lan11g0189 683 MobiDBLite consensus disorder prediction 17 168 - -
Lan11g0189 683 Coils Coil 300 327 - -
Lan11g0189 683 CDD STKc_TLK 404 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0189 Lan-Chr11 1186514 1195972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0189 388 683 MAP Kinase Kinase Kinase AT3G13530 26.756 1.15e-26 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Lan11g0189 Pkinase 4.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0189 K08864 - gmx:100805168 1134.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1197 2 23123569 23133689 Lan11g0189 11 1186514 1195972 LSH