Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0179 ATGGATGTTCAAGTGATAAACTTGGGAGAAGGAAGTGGCCGTCAAGCTATGATAGGTGATGGGGATGCTGAACCTAGGGAAGGTGAAATTAACAATGCTGAAAACTCTGGATCTCATGTTGAGGTTGGGATTTCTGAGCCATACTTGGGTATGTCATTTGATTCGGAAGATGCTGCAAAGACTTTCTGCAATGAATATGCAAGACGTGTGGGTTTCGTCTCCAAAGCTGGCCCGCATGGTCGTTCTAAAGCTGATGGAGCAAATATGTATCGGGAATTTGTGTGTGGCGGGGAAGGTTTGAAAAAAAGGCTTACAGAAAGTTGTGATGCAATGATTAGGATAGAGCAAAAGGGTCAAAGTAAGTGGTTTGTTACAAAATTTCTGAAGGAGCATAGTCATTCCATGTCAGGTTCCACTAAGGTTCATAATAATCGGCCACGTAAGCACTTTTCTAGTGTTGGAAGAACGATGCCCGAAACCTACCAAGGACTGGGGCTTGTTCCAAGTGGTGTAATGTATTCTATGGATGGAAATCGCAATTCAAATGAGAATCTTCATGGGATTAGGAACATTCCCGCAGCAGCTGCTCTTGTTGAAACAGGTCATCCTGTTAAAAATCCCACTGGTGCCATTTATGTATCTACGGACACGAATCGCAATTCCAATGAGAGTCTTCATGGGATTAAGAACATTTCTGCAGCAGCTGCTGCTGTTGAAACAAGTCACCATGTTAAAAATTCCACATTGATGAATTGTACTGTTAGGCCACATGTTCGAAAGAGGACGTTAGGGAGGGATGCTCAGAATCTGCTGGAGTATTTTAAGAAAATGCAAGCTGCGAACCCTGGTTTCTTTTATGCAATACAACTTGATGAAGATAATCATATGACTAACGTGTTTTGGGCAGATGCAAGATCAAGGACAGCTTACAGTCATTTTGGCGATATGGTTAATCTGGACACAACATACAGAGTATATCAATACAGAGTGCCGTTTGCTCCATTCACTGGGATAAATCATCATGGCCAGAGGATTTTGTTTGGTTGTGCACTCCTTTTGGATGATTCTGAGGCTTCTCTTCTGTGGCTCATTAAGACATTTCTGACAGCAATGAATGACCGCCATCCTGTCTCTATAACAACTGATCAAGACAGAGCCATAAAGATAGCTGTTTCACAAGTTTTGCCTCACACCCGCCACTGTATAAGCAAGTGGCACGTGTTGCGAGAAGGCCAGGAAAAATTGGCCCATGTATGTCATATGCATCCAAAATTTCAGGCTGAACTTTATAATTGTATTAACCTGACAGAAACAATTGAGGAATTTGATTCATCTTGGAATTCTATCATCGATAAATATGAACTCGGAAGAAACGATTGGCTTCAGTCATTGTACAATGCTCGTGCTCAATGGGTTCCTGCGTATTTCCGTGATTCATTTTTTGCTGCAATATCTCCTAATCAAGGATTGGATGGTTCTTTTTTTGATGGTTTTGTCAATCAACAGACAACATTACCAATGTTCTTTAGGCAGTATGAACTAGCTTTGGAGAGCTGTCTTGAAAAGGAAATAGAATCAGATGCTGAGACAATTTGCACCACACCAGTTTTGAAGACACCTTCACCAATGGAGAAACAGGCTGCTGATCTTTATACACGGAAAATATTTTCAAAATTTCAAGAAGAACTAGTTGAAACTTTTGTTTATACTGCCAACAGAATTGACGAAGATGGGCCAAACATCAAATTCAGGGTTGCAAAATTTGAGGATGACCAAAAAGCATATATGGTCACAATAAACCATTCTGAGTTGAGAGCTAGCTGTAGTTGCCAAATGTTTGAGTATTCAGGCATTCTTTGTAGGCATGTTCTAACTGTTTTCACTGTGACTAATGTACTTACATTACCATCCCATTACATCCTAAAGCGGTGGACAAGGAATGCAAAAAACAGTGTTGGATTAGAAGAATGTGGTGCAGAATCACATGGACAGGAATCTGTGGCATCACGTTATAGCAATCTATGTCGGGAAGCCATCAGATATGCTGAGGAAGGCGCAATATCTGTGGAAACTTACAAAGCTGCAATGAATGCTCTCAGAGAAGGTGGAAAGAAGGTTTCTGTGGTGAAGAGAAGTGTTGCCAAGGTTGCACCGTCTAGTTATCTAGCCGGTGGAACTGCTTATGATGACAAGAAAACCCCCGCTTCAGCATCAAATACAACCCCTCTTTTATGGCCACGGCAAGATGAAATAACAAGGAGGTTTAATCTTAACGATATTGGTGCTCCTGTTCAATCTGTCACTGATCTAAATTTACCACGGATGGCCCCAGTGTCTTTCCAGCGAGATGATAGCCCCACTGAAAATATGGTGGTTATTCCATGTCTGAAATCAATGACATGGGTGATGGAGAACAAAAACTCAACTCCAGGGAATAGAGTAGCTGTTATCAGTATGAAGTTGCATGATTATTGCAAGAATCCATCAACAGAATCTGAGGTTAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAAGTCTATGGCTTACATCAGCGAACAGCTTTCAACACCAGCTAATAAGGTTGCTGTAATAAATCTCAAGCTCCAAGATGCGGAGACAACTTCTGGTCAGTCTGAAGTTAAGTTTCAGGTGTCCAGGGACACATTGGGCGCTATGCTACGGTCAATGGCCTATATTCGGGAGCAACTTTCTAGTGCTGTAATTCGCGAGCAACTTTCTTCTGTTGGTGTTGGTGATGTGCAGTCAGAACCAATTCTGAAGAAGCATAGGAAGTGA 2805 0.4164 MDVQVINLGEGSGRQAMIGDGDAEPREGEINNAENSGSHVEVGISEPYLGMSFDSEDAAKTFCNEYARRVGFVSKAGPHGRSKADGANMYREFVCGGEGLKKRLTESCDAMIRIEQKGQSKWFVTKFLKEHSHSMSGSTKVHNNRPRKHFSSVGRTMPETYQGLGLVPSGVMYSMDGNRNSNENLHGIRNIPAAAALVETGHPVKNPTGAIYVSTDTNRNSNESLHGIKNISAAAAAVETSHHVKNSTLMNCTVRPHVRKRTLGRDAQNLLEYFKKMQAANPGFFYAIQLDEDNHMTNVFWADARSRTAYSHFGDMVNLDTTYRVYQYRVPFAPFTGINHHGQRILFGCALLLDDSEASLLWLIKTFLTAMNDRHPVSITTDQDRAIKIAVSQVLPHTRHCISKWHVLREGQEKLAHVCHMHPKFQAELYNCINLTETIEEFDSSWNSIIDKYELGRNDWLQSLYNARAQWVPAYFRDSFFAAISPNQGLDGSFFDGFVNQQTTLPMFFRQYELALESCLEKEIESDAETICTTPVLKTPSPMEKQAADLYTRKIFSKFQEELVETFVYTANRIDEDGPNIKFRVAKFEDDQKAYMVTINHSELRASCSCQMFEYSGILCRHVLTVFTVTNVLTLPSHYILKRWTRNAKNSVGLEECGAESHGQESVASRYSNLCREAIRYAEEGAISVETYKAAMNALREGGKKVSVVKRSVAKVAPSSYLAGGTAYDDKKTPASASNTTPLLWPRQDEITRRFNLNDIGAPVQSVTDLNLPRMAPVSFQRDDSPTENMVVIPCLKSMTWVMENKNSTPGNRVAVISMKLHDYCKNPSTESEVKFQLSRVSLEPMLKSMAYISEQLSTPANKVAVINLKLQDAETTSGQSEVKFQVSRDTLGAMLRSMAYIREQLSSAVIREQLSSVGVGDVQSEPILKKHRK* 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0179 934 Pfam FAR1 DNA-binding domain 62 135 IPR004330 -
Lan11g0179 934 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 34 173 - -
Lan11g0179 934 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 242 847 - -
Lan11g0179 934 Pfam MULE transposase domain 317 408 IPR018289 -
Lan11g0179 934 Pfam SWIM zinc finger 601 629 IPR007527 GO:0008270
Lan11g0179 934 ProSiteProfiles Zinc finger SWIM-type profile. 595 631 IPR007527 GO:0008270
Lan11g0179 934 MobiDBLite consensus disorder prediction 134 153 - -
Lan11g0179 934 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 173 IPR031052 GO:0006355
Lan11g0179 934 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 242 847 IPR031052 GO:0006355
Lan11g0179 934 MobiDBLite consensus disorder prediction 1 39 - -
Lan11g0179 934 SMART 26again6 606 633 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0179 Lan-Chr11 1131913 1136305 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan11g0179 MULE 1.6e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0179 - - gmx:100786516 1363.98