Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0166 ATGGCTATTGCAGCACCAGGGCAACTGAACGTGACTGAATCCCCCTCTTGGGGTTCCAGAAGCGTTGATTGCTTCGAGAAATTGGAACAAATTGGCGAGGGTACTTATGGTCAAGTTTACATGGCTAAAGAAATCAAGACTGGTGAGATTGTCGCCCTGAAGAAAATACGAATGGATAACGAGAGAGAGGGGTTTCCTATAACTGCTATACGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTGATCAAGCTGAAAGAAATCGTGACTTCTCCAGGCCCTGAGAAAGATGAACAAGGAAGGCCAGATGGTAACAAGTATAAAGGTGGAATCTATATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTTGCTGACCGTCCTGGGATGAGATTTACAGTTCCCCAAATTAAGTGTTACATGAAACAACTTTTGACCGGGCTTCACTATTGTCATGTAAATCAAGTTCTTCATCGTGATATCAAAGGGTCAAATCTTCTTATAGACAATGAAGGAAATCTGAAGCTTGCTGATTTTGGGTTGGCACGATCATTTTCTAATGACCACAATGCAAATCTTACAAACCGTGTCATTACCTTGTGGTACAGGCCGCCTGAGTTACTGCTAGGGACAACAAAGTATGGACCAGCAGTAGATATGTGGTCTGTTGGGTGCATTTTTGCTGAGCTTCTTCATGGGAAGCCTATCTTTCCAGGAAAAGATGAGCCAGAACAATTAAATAAAATATTTGAACTTTGCGGAGCACCAGATGAGGTGATCTGGCCTGGAGTTTCTAAGATTCCTTGGTATAATCAATTTAAGCCCACAAGGCCAATGAAAAGACGTCTGAGGGAAGTTTTTAGGCATTTTGATCGTCATGCTTTGGAATTGTTGGAGAGGATGCTGGCACTTGATCCGGCGCAGAGAATTACTGCCAAAGATGCACTTGATGCTGAATATTTCTGGACTGATCCATTACCATGTGATCCCAAGAGTTTGCCCAAGTATGAGTCATCACATGAGTTTCAGACAAAGAAAAAGCGTCAGCAACAACGGCAAAATGAAGAAATGGCTAAGCGCCAGAAAATGCAACACCCACAGCAGCACACCCGTCTTCCCCCCATTCAGCAGTCTGGACAACATGCCCAAATGCGGTCAGGACCTAACCAGCAAGTCCATGGCTCTCAACAAGTTCATGCTGGAGGACCTGGTCATCATTATGGGAAGCCTAGAGGTCCATCTGGTGGGCCAGGCAAATATCCTCCAGGCGGGAACCCTGGAGGAGGATACAATCACCCGAACCGTGGAGGTCAAGGAGGAGCAGGAGGTTATGGCAGTGGGCCTTATCCTCCTCCAGGGAGAGGGGCACCTTATGGGTCCAGTGGTATGCCTGGTGGCAGTGGTGGCTTCGGAGTAGGAGCTCCAAATTATACCCAGCAAGGTCCATATGGTGGGTCAGCAGCTGGCCGTGGTTCAAACATGATGGGCGGAAACCGCAATCAACAGTATGGTTGGCAGCAGTGA 1533 0.4618 MAIAAPGQLNVTESPSWGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPIFPGKDEPEQLNKIFELCGAPDEVIWPGVSKIPWYNQFKPTRPMKRRLREVFRHFDRHALELLERMLALDPAQRITAKDALDAEYFWTDPLPCDPKSLPKYESSHEFQTKKKRQQQRQNEEMAKRQKMQHPQQHTRLPPIQQSGQHAQMRSGPNQQVHGSQQVHAGGPGHHYGKPRGPSGGPGKYPPGGNPGGGYNHPNRGGQGGAGGYGSGPYPPPGRGAPYGSSGMPGGSGGFGVGAPNYTQQGPYGGSAAGRGSNMMGGNRNQQYGWQQ* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0166 510 MobiDBLite consensus disorder prediction 496 510 - -
Lan11g0166 510 MobiDBLite consensus disorder prediction 370 400 - -
Lan11g0166 510 CDD STKc_CDK9_like 25 324 - -
Lan11g0166 510 MobiDBLite consensus disorder prediction 337 366 - -
Lan11g0166 510 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Lan11g0166 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Lan11g0166 510 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0166 510 MobiDBLite consensus disorder prediction 335 510 - -
Lan11g0166 510 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0166 510 PANTHER CELL DIVISION PROTEIN KINASE 5 452 - -
Lan11g0166 510 PANTHER CYCLIN-DEPENDENT KINASE C-2 5 452 - -
Lan11g0166 510 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0166 510 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Lan11g0166 510 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Lan11g0166 510 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0166 Lan-Chr11 1058568 1064654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0166 1 510 Core Cell Cycle Gene Families AT5G10270 77.563 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lan11g0166 Pkinase 3e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0166 K08819 - zju:107421832 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0166 11 1058568 1064654 Lan9g1406 9 21012784 21017370 LSH