Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0162 ATGAAGAAGAAACTAGATACTCGTTTCCCTGCTGCTCGGATTAAGAAAATTATGCAAGCGGACGAGGATGTTGGGAAGATTGCAATGGCTGTGCCCCTTCTAGTTTCTAAAGCACTAGAGCTATTTCTGCAAGATTTATGTGATCAAACATACGATATAACTGTGAGGAAGGGTGCAAGGACGATGAATGCTATCCATTTGAAGCAGTGTGTACAAACCTTTAATGTCTTTGATTTTCTGAAAGATATTGTCAGCAAGGTTCCTGATCTAGGTGGCTCCGTTGCTTCTGGTGACGATTCTGCTACAACCAAGAGGAGGAAAGTGGCTGAAGATGGTGATAACGACAGCGACGAGGAGCAAAAGAGAAATAAAATGCCAGAGCCTGGACATACTAGTGGCAGAGGAAGGGGCAGGGGCAGAGGTAGGGGTCGTGGCCGAGGAAGTCGAACAGTAGATCAAGAGATGGCTTCACACATCAAGTTTGAAGACGATTCTAATATATTGAACCAAAATGATAAGCATACTGGAAGCAATGAAAGCCTGGAAAATGTGCCAGAACCTGAAGAAGTTAAGCATAGTTTTCCGGCTAGCAAACCTGCTGAAACATGCATTCGAAACTTTGATTTAAATATGGAACCAGTTGAGAGCATGGATTCGTTAGATGTACCTACTCCAATCCCATCTAGTTCGCCTGGGAAATCAGTCTCCGAAGAGAAGCATGAGGAATACCCTGGATGGTCGTTGTCTGATATGGAAAAAATGGCCATCGATCCCATACAACTGGCCAACTTAAATAGAAATATAGATGAAGATAAGGAGGATTATGATGAAGAAATGTAG 840 0.4298 MKKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDQTYDITVRKGARTMNAIHLKQCVQTFNVFDFLKDIVSKVPDLGGSVASGDDSATTKRRKVAEDGDNDSDEEQKRNKMPEPGHTSGRGRGRGRGRGRGRGSRTVDQEMASHIKFEDDSNILNQNDKHTGSNESLENVPEPEEVKHSFPASKPAETCIRNFDLNMEPVESMDSLDVPTPIPSSSPGKSVSEEKHEEYPGWSLSDMEKMAIDPIQLANLNRNIDEDKEDYDEEM* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0162 279 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Lan11g0162 279 MobiDBLite consensus disorder prediction 217 249 - -
Lan11g0162 279 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 278 - -
Lan11g0162 279 SUPERFAMILY Histone-fold 3 88 IPR009072 GO:0046982
Lan11g0162 279 MobiDBLite consensus disorder prediction 90 196 - -
Lan11g0162 279 MobiDBLite consensus disorder prediction 145 169 - -
Lan11g0162 279 MobiDBLite consensus disorder prediction 100 134 - -
Lan11g0162 279 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Lan11g0162 279 PANTHER HISTONE SUPERFAMILY PROTEIN 1 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0162 Lan-Chr11 1038908 1041612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0162 1 268 CCAAT-HAP5 Transcription Factor Family AT3G12480 40.789 5.97e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lan11g0162 CBFD_NFYB_HMF 1.7e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0162 K21752 - gmx:100814800 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0162 11 1038908 1041612 Lan9g1412 9 21034969 21037917 LSH