Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0158 ATGGCTTCTATAGCTCATTCTAATGTTGTTGCTGAACCACAACACCCTAAAGGTGAGAATAAGCAAAAGAATGAAGGAAGAAATAGGAGGGTACTTAAGGATATTGGTAATCTTGTTGTTAAGCAAGTAGATCCTGTTGCTAATGTGCCTAAGCGTATCACAAGGAACCATGGTTGTCAAATGTTGGCTAATGCTCAAGCAGCAGCAGAGAAAAACAAGAAGCCAAACAGTGATGTAGGAAACTTGGTTGCTGTAACAAAGGTGGAACAAACTAAGAAGCCAACAGAACCTGAGGTTATTATCATCAGCTCTGATGATGAAGAGGAACAAAAGGAGAAGGAAGTTGTTAAAGGAGGAAGAAAGACAAGAGAAAAGGTTGCTGTTAGGGGAAAGAACAATAAGGCCTTCAGTGCTGTCCTATCAGCTAGAAGCAAGGCTGCTTGTGGATTTACTCACAAGCCAAAAGATTTGGTATTGGTAGATGACATTGACATTGCTGATATTGCCAATGAATTGGAAGCAGTGGAGTATCTTGATGACATTTATAAGTTCTACAAGCTAACTGAGGATGATGGTCGAGTGCATGATTACATGCCTTCGCAGCCCGACATCAACATCAAGATGCGATCAATTCTGTTTGATTGGTTAATAGAAGTGCATCGAAAGTTCGAACTCATGCCGGAGACTCTCTATTTGACACTCAATATAGTCGACCGATTCTTATCAATGAAGGCTGTACCTAGAAGGGAACTTCAATTAGTTGGTATCAGTTCAATGTTGATGGCTTGCAAGTATGAAGAAATATGGGCACCAGAGGTTAATGACTTTGTATGCATATCTGACAATGCATATGTTAGAGAAAACATTCTCATCATGGAGAAAACAATCTTGAGTAAGCTTGAGTGGTATCTAACCGTTCCTACAACTTATGTCTTCCTTGTTCGGTATATCAAAGCCTCTACCCCCTCTGATAAAAAGATTGAGGACATGGTGTTTTTTCTTGCTGAGCTTAGTTTGATGGATTACCCTCTTGTGATCTCATACTGCCCTTCTATGATTGCTGCATCTGCTGTATATGCTGCTAGATGCACCCTTGGAAGGAGCCCTTATTGGACCGAGACTCTAGAACACTACACAGGCTATTATGAGGAACAACTAAGGGATTGTGCTAAACTCATGGTCAACTTTCATTCTTTTGCTCCAGAAAGTAAGCTTAGGGCTGTTTACAAGAAATTCAGTAGTCTTGAGCATAGTGCTGTTGCTCTTGTTACTCCAACAAAAAACTTGTTAGCATAG 1296 0.4043 MASIAHSNVVAEPQHPKGENKQKNEGRNRRVLKDIGNLVVKQVDPVANVPKRITRNHGCQMLANAQAAAEKNKKPNSDVGNLVAVTKVEQTKKPTEPEVIIISSDDEEEQKEKEVVKGGRKTREKVAVRGKNNKAFSAVLSARSKAACGFTHKPKDLVLVDDIDIADIANELEAVEYLDDIYKFYKLTEDDGRVHDYMPSQPDINIKMRSILFDWLIEVHRKFELMPETLYLTLNIVDRFLSMKAVPRRELQLVGISSMLMACKYEEIWAPEVNDFVCISDNAYVRENILIMEKTILSKLEWYLTVPTTYVFLVRYIKASTPSDKKIEDMVFFLAELSLMDYPLVISYCPSMIAASAVYAARCTLGRSPYWTETLEHYTGYYEEQLRDCAKLMVNFHSFAPESKLRAVYKKFSSLEHSAVALVTPTKNLLA* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0158 431 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Lan11g0158 431 PIRSF Cyclin_A_B_D_E 2 431 IPR039361 -
Lan11g0158 431 SUPERFAMILY Cyclin-like 308 428 IPR036915 -
Lan11g0158 431 SUPERFAMILY Cyclin-like 170 304 IPR036915 -
Lan11g0158 431 MobiDBLite consensus disorder prediction 1 33 - -
Lan11g0158 431 SMART Cyclin_C_2 307 426 IPR004367 -
Lan11g0158 431 CDD CYCLIN 208 297 IPR013763 -
Lan11g0158 431 Pfam Cyclin, N-terminal domain 180 304 IPR006671 -
Lan11g0158 431 PANTHER CYCLINS 21 427 IPR039361 -
Lan11g0158 431 Gene3D - 194 305 - -
Lan11g0158 431 PANTHER CYCLIN-B1-4 21 427 - -
Lan11g0158 431 Pfam Cyclin, C-terminal domain 307 424 IPR004367 -
Lan11g0158 431 MobiDBLite consensus disorder prediction 16 33 - -
Lan11g0158 431 CDD CYCLIN 305 394 IPR013763 -
Lan11g0158 431 SMART cyclin_7 311 395 IPR013763 -
Lan11g0158 431 SMART cyclin_7 214 298 IPR013763 -
Lan11g0158 431 Gene3D - 180 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0158 Lan-Chr11 1014731 1017405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0158 64 423 Core Cell Cycle Gene Families AT2G26760 54.595 7.06e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0158 K21777 - gmx:547782 533.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1231 2 23394728 23397599 Lan11g0158 11 1014731 1017405 LSH