Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0144 ATGTCTTCACTTGAGGAAATTCATGACCAACAACAACTCCTCCTTATCCACGATCTTCACGATCTTTCCCTCAAACCTCAGAGTGAGATGGCAGCACGTGAATGTGAGAAACAGCATGAAGGGATTTGTGCGATTTGTTTGGATAAGATAGTTCTTCAGGAAATGGCTCTTGTAAAAGGTTGCGAGCATGCTTACTGTGTGACATGCATCCTTCGCTGGGCCACATACCGTCAGAATGCCACTTGCCCTCAGTGTAAGCATCCATTTGAGTTCCTCAATGTTCATCGCTCACTCGATGGAAGCATCCATGATTACATGTTTGAGGAAAGTCTTTGCCTACTACTTAGAGCTCCTTGGTTTAAACCTTTAGTAGTTGAAGATCATGTGCATCATGAAGATGTATATGATGATGACATTGGAAACTACTATCAGTATGAGTATGGGTTTGATTATGAAGATGACGATGAAGATCTAGATGAAGTTTACTTTGGTGGCTCAGCAAGTCTTCGCATTGGTAACCGTAGATGGGGAGATAATGGTTATGTTAGGGCTGGCCGTCTTGAAGCTAGGCCGGCCTACCGAACAAACTTCCAAGAATCAGGAGCTGGTTCATCTCGTGGGGCAAAGAAGAAAGCGGCTCGAAAAAGTACAACAAACCTCCAAGAATCAGGAAGTAGTTCATCTCGTGAGCCAAAGAAGAAAGAGGCTGTAGAAAGTGCAACAAACCTCCAAGAATCAGGAGCTAGTTCATCTTGTGAGCCAAAGAAGAAAGAGGCTGCTGAAAGTACAACAGGGCGACGAGCCAAGAGGGCATTGAAACGCGAAGCCGCTGATATAGCAGCTGCAGCAAAGCATCAACAGCATTTGGTAAGGTTGGGCAGGAAATGA 888 0.4482 MSSLEEIHDQQQLLLIHDLHDLSLKPQSEMAARECEKQHEGICAICLDKIVLQEMALVKGCEHAYCVTCILRWATYRQNATCPQCKHPFEFLNVHRSLDGSIHDYMFEESLCLLLRAPWFKPLVVEDHVHHEDVYDDDIGNYYQYEYGFDYEDDDEDLDEVYFGGSASLRIGNRRWGDNGYVRAGRLEARPAYRTNFQESGAGSSRGAKKKAARKSTTNLQESGSSSSREPKKKEAVESATNLQESGASSSCEPKKKEAAESTTGRRAKRALKREAADIAAAAKHQQHLVRLGRK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0144 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 164 IPR013083 -
Lan11g0144 295 MobiDBLite consensus disorder prediction 251 273 - -
Lan11g0144 295 ProSiteProfiles Zinc finger RING-type profile. 43 86 IPR001841 -
Lan11g0144 295 Pfam Ring finger domain 43 86 IPR001841 -
Lan11g0144 295 ProSitePatterns Zinc finger RING-type signature. 61 70 IPR017907 -
Lan11g0144 295 SMART ring_2 43 85 IPR001841 -
Lan11g0144 295 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 241 295 - -
Lan11g0144 295 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 21 235 - -
Lan11g0144 295 MobiDBLite consensus disorder prediction 195 273 - -
Lan11g0144 295 SUPERFAMILY RING/U-box 33 92 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0144 1 295 C3H Transcription Factor Family AT5G19430 49.342 8.60e-74 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0144 - - lang:109360548 511.916