Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan11g0135 | ATGATGGCTTTCTTTAGGAACTTTCAAAATGATACAGTCTCACATAGTGTCATGGAAGATAAAGTCAAAGGACACAATGCGAATAGTGTACATAGATTGGTAGGTAATCAATGTCCTGATGCAACTTCTAGTGAGAAAGAATTTGATATGAACACGGAGGCACAATATCAGAGTGATGGTGAACCAGATGGTGCCAGTAGACTTCAAAATGAGGAGGCAGCAATTGATGATGGAGCTGCTAATAGAGAATCAAACTTACAGACTGCTGCTAGTAAAACAACTACGGTCGGGAGGTGGGGTTCGACATTTTGGAAGGACTGCCAACCTATGCATCCACAAAATGGTTCTGAATCTGGGCATGAATCAAAAAGTGAATCGGACTATAGAAATGAAGATGGATCTGAAGGTAATTCATTGGATGGAAAAGGGGAAAGATTAGACTCAGAAGATGATGAACAAAAGGAAGAAGGAAAAGGTCCAGTAGGCCATCATGATGCTCCTGCTGAAGAAATGTTGTCTGATGAATATTATGAGCAGGATGAGGCAGAGCAGCGTAACTCATTGCAGCAGCGGGGGATTCATAAGTTCACTAGATCGAATTTGTGGCCTCAACAAGTGTCCACTTTTCCCAATAGAAATTCAAATAAGAAATCTAGGATTTCAAATGATGTCGAAGAAGATGATGATGATGGTGATAACGACGATGGTGACAGTGATGCTGATTATGAAGAGGAGGATGAAGCAGATGAAGATGATCCTGATGATGCAGACTTTGAGCCTGCCACAAGTGTTCATGCAGCAAACAAGGATAAAGATTGGGAAGGTGAAGGCTCATATGAAGATGATGATAGTGATGAAAATGTAGATGTCTCAGATGACGACGACTCTTTCTATGGTAAAAAACCCAAGGGAAGGCAACAAGCTAAAGTTGGACAAAGCCTAAAATCTACTAGAGATCGCAAAACTTATCCGGCATCTGGTCGACAAAGAAGAGTTAAATCAACTTTTGAAGACAATGAGTCAATAGCAGATGATTCTGACAGTGGTAGTGACGAGGATTTCAAAAGCATTAAAAAGAGAGGTGTTCATGTCCGCAGGAATAATGGCTGCTCTTCCTCACCCACAAGTTTTTCTATGCGCAACAATGAGGTTCGCACTTCTACTAGGACAGTTAGGAAGGTATCATATGTTGAAAGTGATGAAAGTGAAGAAGCTGATGAAGGGAAGAAGAAAAAGTCCCAAAAGGAAGAAATTGAAGAAGATGATGCTGACTACATTGAAAAGGTGCTTTGGCATCAGCCGAAAGGCATGGCCGATGATGCTCAAAGGAATAATAGATCAACATCCCCCATTTTAATGAGTCACTTGTTTGATTCTGAGGTTGATTGGAATGAGATGGAATTCTTGATAAAATGGAAAGGCCAGTCACATTTGCACTGTCAGTGGAAATCTTTTGCTGACCTGCAAAACCTCAGTGGTTTTAAGAAGGTTTTGAATTATACAAAGAAGATAATGGAAGACATTAAGCATAGGAAGAGTATCTCAAGAGAGGAGATTGAGGTCAATGATGTCAGTAAGGAGATGGATTTAGATATTATCAAACAAAACAGTCAGGTCGAAAGAATTATTGCAGATAGGATCAGCAAGGATAGTTCTGGAATGGTTGTTCCAGAATACCTGGTCAAGTGGCAAGGGCTATCTTATGCTGAAGCAACTTGGGAAAAGGACATTGATATCACTTTTGCTCAGCATGTTATTGATGAGTATAAGGCTCGTGAGGCTGCAATGTCGGTGGTTCAAGGAAAGACGGTAGATTCCCAGCGTAAGAATAGCAAAGCAAGTTTGCGGAAACTTGAGGAACAACCCGAATGGTTGAAAGGTGGAAAGCTCCGTGATTATCAACTAGAGGGTCTGAATTTTCTTGTTAACAGTTGGAGGAACGATACAAATGTCATTTTAGCTGATGAAATGGGTCTTGGTAAAACTGTCCAGTCGGTATCAATGCTAGGTTTTCTACAGAATGCCCAGAAAATCCATGGTCCTTTTCTTGTAGTTGTTCCATTGTCTACTTTATCAAACTGGGCCAAAGAATTCCGAAAGTGGCTTCCTGATATGAACATTATTGTATATGTTGGTACTCGTGCAAGTCGAGAGGTTTGTCAACAGTACGAGTTTTATGATGATAAGAAGGCTGGCAGACCAATAAAATTTAATGCACTGTTGACTACATATGAAGTAGTTTTGAAGGACAAGGCTGTTCTCTCCAAGATCAAATGGTGTTATCTTATGGTAGATGAGGCTCATAGACTTAAAAATAGTGAGGCGCAGTTGTACACAGCACTTTCAGAATTTAGCACCAAGAATAAGTTGCTTATCACTGGTACTCCTCTACAGAACAGTGTTGAAGAGCTATGGGCTTTGCTCCACTTCCTTGACGCTAACAAGTTCAAGAGCAAGGATGATTTTGTTCAAAATTATAAAAATCTGAGTTCTTTCAATGAGAATGAGCTTGCAAATCTTCATATGGAGTTAAGACCTCACATACTTCGAAGAGTTATCAAAGACGTGGAGAAATCATTACCCCCAAAAATTGAGCGCATCCTTAGGGTTGAAATGTCTCCTCTTCAGAAACAGTACTATAAGTGGATTTTGGAACGCAACTTTCATGATTTGAACAAGGGAGTTCGTGGTAACCAGGTTTCTCTTCTCAATATTGTGGTGGAACTGAAGAAGTGCTGCAACCATCCCTTCTTGTTTGAAAGCGCCGACCATGGTTATGGTGGAGACTCTGTTGATAACAGTAAGCTAGAGAGAATTGTCTTTAGCAGTGGCAAGCTGGTCATACTTGATAAGCTACTTGTTAGGTTGCATGAAACCAAGCATCGTGTTCTAATTTTCTCTCAGATGGTTAGGATGCTGGATATACTGGCAGAGTATATGTCACTTCGTGGATTTCAATTTCAGAGGCTTGATGGCAGTACAAAAGCTGAGCTCCGACATCAGGCAATGGAGCATTTCAATGCCCCAGGTAGTGATGATTTTTGCTTCCTTCTCTCAACGCGAGCAGGGGGTCTGGGCATCAACCTTGCCACGGCAGATACTGTAATAATATTTGATTCTGATTGGAATCCTCAAAATGACCTGCAGGCAATGAGCAGAGCCCATAGAATTGGGCAACAGGAAGTTGTTAACATATATAGGTTTGTAACAAGCAAAAGTGTTGAGGAAGATATTTTGGAACGTGCTAAGAAGAAGATGGTTCTCGACCACTTGGTGATTCAAAAACTTAATGCAGAGGGTAGGCTGGAGAAGAAAGAGGCCAAAAAAGGAGGAAGTTATTTTGACAAAAATGAGTTGTCTGCAATTTTACGGTTTGGAGCAGAAGAACTTTTTAAGGAAGAAAGAAACGATGAAGAAAGCAAGAAACGACTCTTAAGTATGGATATAGACGAGATTCTTGAAAGAGCAGAGAAGGTCGAAGAGAAAGAAGCTGAGGGAGAGGATGGACACGAGTTATTAAGTGCATTTAAGGTTGCCAATTTTCGTAATGATGAAGACGATGGAGGTTTCTGGAGTCGGATGATAAAGGCTGATGCTGTATTCCAAGCAGAGGAAGCTCTAGCTCCACGTTCTGCAAGGAATATTAAAAGTTATGCAGAAGCTAATGAGTATGACAGAAGTAATAAAAGAAAAAAGAAGGAACCTGAACCTCCTGAGCGAGTTCAGAAACGCCGGAGAGCAGAGTGTTCGGCTCCTGCAGTACCATTGATTGATGGAGCATTTGTGCAAGTGAGAAATTGGTCATATGGGAATTTATCCAAAAGAGATGCACAACGATTTTCTCGTTCGGTTATGAAATATGGAATCGAGGATCAAATGAACTTAATTGTTGCCGAGGTTGGTGGTGCTGTTGGAGCAGCTCCACCTGAAGCACAGACTGAAATCTTCAATGCTCTAATTGATGGCTGTACTGAAGCAGTGGAACATGGAAGTGTAGATCCCAAGGGGCCTTTGCTGGATTTTTTTGGTGTCCCAGTTAAGGCAAATGATTTACTTACCCGTGTCCAGGAACTTCAACTCCTGGCAAAGCGCATCAGTAGATATGAAGATCCTATTGCACAATTTCGTGTTTTATCATATCTCAAGCCTTCAAATTGGTCGAAAGGTTGTGGATGGAATCAAATTGATGATGCAAGATTGCTTCTAGGAGTACATTACCACGGATTTAGTAATTGGGAGAAGGTTAGATTAGATGAAAGGCTTGGTCTTACGAAAAAGATTGCCCCAGCAGAACTTCAACACCATGAAACTTTCCTGCCAAGAGCTCCAAATTTGAGAGACCGTGCTAATGCCCTTTTGGAGCAAGAACTTGCTGTTCTTGGTGGAAACCATGCCAATAGCAGAGTTGGCCGGAAGTCGTCTAAGAAAGAGAGAGAAAATATGATGAACAACTCGCTGTTGCGTGGGCAGGAAAAGAAAAAACCAGGTTCTGCTAAAGTTAGTGTCCAAATGAGAAAGGATAGACTTAAGAAACCCCAAAAGGTTGAACCTATAGTAAAAGAGGAGGGTGAAATGTCTGACAATGACGAAGTATATGAGCAATTCAAGGAGGTAAAATGGATGGAGTGGTGTCAAGATGTGATGGTTGAAGAAATGAAAACCTTGAAACGTCTTCACAGATTGCAGACAACAAGTGCCAATCTTCCCAAGGAAAAGGTGCTTCAAAAAATACGCAACTATTTACAACTTCTTGGTCGAAGGATAGATCAAATTGTGTTAGATCATGAAGTGGAACCCTACAAGCAAGATAGAATGACAGTGCGGCTCTGGAAATATGTCTCCACCTTTTCCCATCTTTCAGGGGAGAGGCTTCATCAAATATATTCCAAACTTAAACAGGAGCAACAAGATGAGGCCGGGGTTGGCCCTTCTCATGCCAATGGTTCAGCATCTGTTCCATATAGCAGAAACGGAAACCCGTTCCCTCGCCATATGGAGAGGCAAAGAGGATACCAAAATAGGGCTAACTACCAAATGTCAGAACCAGTTAATAATACCGGGAAATCTGAGGCTTGGAAACGGAGAAGAAGAGCTGAAAGTGTCGATCAATTCCAGGGGCAGTCGCCACCTCAAAGAACCATGAGTAATGGAATCCGGATTTCTGATGCTAGTGCACAAGGCATTCTTGGGGCTGGACCATCTGGCAAACGTTTTGTTAGTGAGAAACCTTATAGGACACAACCTGGTGGGTTTCCTTCAAAACAAGGCTCCACTTCAGGATCTGAGAAATATCTCTACACAGTGGGATTTGCAATCTCTAACGAGGTGGCTGAAGCCGATGATCTGGTGCAAGATGAAATTGAGCTTTGA | 5370 | 0.4156 | MMAFFRNFQNDTVSHSVMEDKVKGHNANSVHRLVGNQCPDATSSEKEFDMNTEAQYQSDGEPDGASRLQNEEAAIDDGAANRESNLQTAASKTTTVGRWGSTFWKDCQPMHPQNGSESGHESKSESDYRNEDGSEGNSLDGKGERLDSEDDEQKEEGKGPVGHHDAPAEEMLSDEYYEQDEAEQRNSLQQRGIHKFTRSNLWPQQVSTFPNRNSNKKSRISNDVEEDDDDGDNDDGDSDADYEEEDEADEDDPDDADFEPATSVHAANKDKDWEGEGSYEDDDSDENVDVSDDDDSFYGKKPKGRQQAKVGQSLKSTRDRKTYPASGRQRRVKSTFEDNESIADDSDSGSDEDFKSIKKRGVHVRRNNGCSSSPTSFSMRNNEVRTSTRTVRKVSYVESDESEEADEGKKKKSQKEEIEEDDADYIEKVLWHQPKGMADDAQRNNRSTSPILMSHLFDSEVDWNEMEFLIKWKGQSHLHCQWKSFADLQNLSGFKKVLNYTKKIMEDIKHRKSISREEIEVNDVSKEMDLDIIKQNSQVERIIADRISKDSSGMVVPEYLVKWQGLSYAEATWEKDIDITFAQHVIDEYKAREAAMSVVQGKTVDSQRKNSKASLRKLEEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQKIHGPFLVVVPLSTLSNWAKEFRKWLPDMNIIVYVGTRASREVCQQYEFYDDKKAGRPIKFNALLTTYEVVLKDKAVLSKIKWCYLMVDEAHRLKNSEAQLYTALSEFSTKNKLLITGTPLQNSVEELWALLHFLDANKFKSKDDFVQNYKNLSSFNENELANLHMELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESADHGYGGDSVDNSKLERIVFSSGKLVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYMSLRGFQFQRLDGSTKAELRHQAMEHFNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGRLEKKEAKKGGSYFDKNELSAILRFGAEELFKEERNDEESKKRLLSMDIDEILERAEKVEEKEAEGEDGHELLSAFKVANFRNDEDDGGFWSRMIKADAVFQAEEALAPRSARNIKSYAEANEYDRSNKRKKKEPEPPERVQKRRRAECSAPAVPLIDGAFVQVRNWSYGNLSKRDAQRFSRSVMKYGIEDQMNLIVAEVGGAVGAAPPEAQTEIFNALIDGCTEAVEHGSVDPKGPLLDFFGVPVKANDLLTRVQELQLLAKRISRYEDPIAQFRVLSYLKPSNWSKGCGWNQIDDARLLLGVHYHGFSNWEKVRLDERLGLTKKIAPAELQHHETFLPRAPNLRDRANALLEQELAVLGGNHANSRVGRKSSKKERENMMNNSLLRGQEKKKPGSAKVSVQMRKDRLKKPQKVEPIVKEEGEMSDNDEVYEQFKEVKWMEWCQDVMVEEMKTLKRLHRLQTTSANLPKEKVLQKIRNYLQLLGRRIDQIVLDHEVEPYKQDRMTVRLWKYVSTFSHLSGERLHQIYSKLKQEQQDEAGVGPSHANGSASVPYSRNGNPFPRHMERQRGYQNRANYQMSEPVNNTGKSEAWKRRRRAESVDQFQGQSPPQRTMSNGIRISDASAQGILGAGPSGKRFVSEKPYRTQPGGFPSKQGSTSGSEKYLYTVGFAISNEVAEADDLVQDEIEL* | 1790 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan11g0135 | 1789 | SMART | chromo_7 | 424 | 505 | IPR000953 | - | |
| Lan11g0135 | 1789 | SMART | chromo_7 | 535 | 594 | IPR000953 | - | |
| Lan11g0135 | 1789 | Pfam | Helicase conserved C-terminal domain | 945 | 1058 | IPR001650 | - | |
| Lan11g0135 | 1789 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 642 | 814 | IPR014001 | - | |
| Lan11g0135 | 1789 | MobiDBLite | consensus disorder prediction | 1740 | 1760 | - | - | |
| Lan11g0135 | 1789 | CDD | CD2_tandem | 535 | 591 | - | - | |
| Lan11g0135 | 1789 | Pfam | Chromo (CHRromatin Organisation MOdifier) domain | 538 | 592 | IPR023780 | - | |
| Lan11g0135 | 1789 | Coils | Coil | 1782 | 1789 | - | - | |
| Lan11g0135 | 1789 | MobiDBLite | consensus disorder prediction | 189 | 217 | - | - | |
| Lan11g0135 | 1789 | MobiDBLite | consensus disorder prediction | 1465 | 1512 | - | - |
Showing 1 to 10 of 45 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan11g0135 | K11367 | - | gmx:100792398 | 2880.12 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan2g1250 | 2 | 23538191 | 23556780 | Lan11g0135 | 11 | 838835 | 857149 | LSH |
Showing 1 to 1 of 1 entries