Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0119 ATGTCATCGGGAAGTTCTTTGAATGTCGTGTTGTCAAAGAAGACGTCAGTTTTTGGTTTGAAACTATGGGTTTTGATTGGCATAGGTGTTGGTGCATTTATAGTTATGGTTCTTTGTATATTATATATATGGGTGATTTTTCGGAGAAAGTCTAGGACAAGGAGATCTCTGGATAAGCACTCTCTATCCCAAATACCAAATGTCTCGAAAGATATCAACGTTGACAAAGTTGGGGTGCAGAATTCTCATGTTCAACAAGAAAATGCATTAGTTCCTCTTCATGACAAGGCGAATGATAAGAATGCAGATAATGTATCTGTTCATTTGGGCATGAGAAGATTCAGTGATCCCGATAATGTAAGTCAATGCAGCTCAATTTATCATCATGAGAGAGGATTCAGTTCAATGTCAGGGGAAGAAGGAAGCTCCGGGAATGCTAACAAGCAGACTGCATTGTCGTATGGAGGGTTGGTGACTGCTTCTCCTTTAATCGGCTTGCCTGAACTTTCTCATCTTGGGTGGGGCCACTGGTTTACGCTTAGAGATCTGCAACAAGCAACCAATCGTTTCTCAGCAGAGAACATTGTTGGTGAGGGTGGGTATGGGGTTGTTTACAAAGGAAGACTGATCAATGGAACTGAGGTGGCAGTGAAGAAACTTCTCAACAACTTGGGACAAGCGGAGAAAGAATTCAGGGTTGAAGTGGAAGCTATTGGCCATGTTAGACATAAAAATCTTGTGCGTCTGCTTGGATATTGCGTAGAAGGAGTTAATAGGCTGCTAGTGTATGAATATGTGAACAGTGGTAACTTAGAACAATGGCTACATGGAGCCATGCACCAACATGGGATACTTACCTGGGAAGCCCGCATGAAAGTTTTACTCGGCACAGCCAAAGCGCTTGCTTACTTACATGAAGCTATAGAACCAAAAGTGGTTCACCGGGATATAAAGTCTAGCAACATATTGATTGATGATGAGTTCAATGCAAAGGTTTCTGATTTTGGTTTGGCCAAACTTCTAGATTCTGGAGAAAGTCACATAACCACTAGAGTAATGGGAACATTTGGTTATGTGGCACCGGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGATATTTATAGCTTTGGCGTCCTCCTGCTCGAAGCAATTACCGGAAGGGACCCTGTAGACTATGCGCGTCCTGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTTGGGACAAGGAGGGCAGAGGAAGTTGTGGACTCAAGCCTTGAAGTTAAACCATCAACACATGCTTTAAAGCGTGCCCTTCTGGTTGCACTTAAGTGTGTTGATCCTGATGCAGAAAAGAGGCCCAAAATGAGTCAGGTTGTGAGGATGCTCGAAGCTGATGAATATACAGTCCGAGAGGATCGAAGGAATAGAAGAAGAAGCCGCACTGCCAGCATGGAAATTGAAGCTGTGAAGGAATCAGGTCCATCTGATGCTGAAAAGGTGGGACATTCAGAAAGCCATGCGCCCGAAACAAGTCAAGGATAG 1539 0.4321 MSSGSSLNVVLSKKTSVFGLKLWVLIGIGVGAFIVMVLCILYIWVIFRRKSRTRRSLDKHSLSQIPNVSKDINVDKVGVQNSHVQQENALVPLHDKANDKNADNVSVHLGMRRFSDPDNVSQCSSIYHHERGFSSMSGEEGSSGNANKQTALSYGGLVTASPLIGLPELSHLGWGHWFTLRDLQQATNRFSAENIVGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCVEGVNRLLVYEYVNSGNLEQWLHGAMHQHGILTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAITGRDPVDYARPANEVNLVEWLKMMVGTRRAEEVVDSSLEVKPSTHALKRALLVALKCVDPDAEKRPKMSQVVRMLEADEYTVREDRRNRRRSRTASMEIEAVKESGPSDAEKVGHSESHAPETSQG* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0119 512 Coils Coil 210 230 - -
Lan11g0119 512 MobiDBLite consensus disorder prediction 469 512 - -
Lan11g0119 512 SUPERFAMILY Protein kinase-like (PK-like) 174 463 IPR011009 -
Lan11g0119 512 SMART serkin_6 190 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0119 512 CDD STKc_IRAK 196 462 - -
Lan11g0119 512 PANTHER OS01G0323000 PROTEIN 2 509 - -
Lan11g0119 512 PANTHER RECEPTOR-LIKE KINASE PLANT 2 509 - -
Lan11g0119 512 Gene3D Phosphorylase Kinase; domain 1 172 265 - -
Lan11g0119 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Lan11g0119 512 Pfam Protein kinase domain 192 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0119 512 ProSiteProfiles Protein kinase domain profile. 190 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0119 512 MobiDBLite consensus disorder prediction 469 504 - -
Lan11g0119 512 Gene3D Transferase(Phosphotransferase) domain 1 266 480 - -
Lan11g0119 512 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0119 Lan-Chr11 686026 690492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0119 167 464 Trihelix Transcription Factor Family AT1G70460 50.165 6.79e-95 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan11g0119 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0119 - - gmx:100778444 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0119 11 686026 690492 Lan9g1444 9 21281302 21285867 LSH
Lan4g0918 4 11198801 11203895 Lan11g0119 11 686026 690492 PCT
Lan9g1444 9 21281302 21285867 Lan11g0119 11 686026 690492 PCT
Lan11g0119 11 686026 690492 Lan4g0918 4 11198801 11203895 PCT
Lan11g0119 11 686026 690492 Lan9g1444 9 21281302 21285867 PCT