Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0111 ATGGAAGAACAAAACTTTGAAACAACACAAACAACCATACCTACATTCCCTCCTGCTGTTCACAAATCCCTCCATGTCCTCCGTCGAAGCCGGAGGCTATGGCGGAAAGATGGCAGCAGCAGAGAACTCAAGGTGCAACACCATATAAAGGAAACTGTGAAGGAGGATAATAATAATAATAATAGTAATAGTAATGATAAAAGTTATGTTGTGAAGGAAGAAGAAGAAGAAGAAGAAATAGAGAATAAGATTCATGCATTGAAGAGGATTGTACCAAATGGAGAATCACTTGGTGTAGAAAATCTTTTTGATGAAACTGCTGGATATATTATGGCTTTGCAGTCTCAAATCAAAGCCTTGAGAACTCTTGCTACTTTCTTTGATAACTTGGAAAAGGAGAACACAAAGCTTGGAGGTTGA 420 0.381 MEEQNFETTQTTIPTFPPAVHKSLHVLRRSRRLWRKDGSSRELKVQHHIKETVKEDNNNNNSNSNDKSYVVKEEEEEEEIENKIHALKRIVPNGESLGVENLFDETAGYIMALQSQIKALRTLATFFDNLEKENTKLGG* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0111 139 Coils Coil 70 90 - -
Lan11g0111 139 MobiDBLite consensus disorder prediction 36 70 - -
Lan11g0111 139 PANTHER TRANSCRIPTION FACTOR PAR1 26 137 - -
Lan11g0111 139 CDD bHLH_AtIBH1_like 83 124 IPR044549 GO:0006355
Lan11g0111 139 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 26 137 IPR044660 GO:0006355
Lan11g0111 139 MobiDBLite consensus disorder prediction 36 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0111 Lan-Chr11 632802 634070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0111 52 121 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00120 35.714 2.24e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0111 - - mtr:MTR_5g091690 123.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0111 11 632802 634070 Lan9g1451 9 21324867 21325417 LSH