Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0103 ATGGAAAGCCCTTCCAATAAGCTCCAGCGTCGATTCTCGGTCGGAAGACAATCCTCTCTGATGCCGGAACGCAGCAACGATGGTTCCACCTACGACGGATCATCGGTTTCCGAGGCGGCGTTGGACCCGGCGGTAGGGTTGATGTATATGGCCAATGAAGGTGACTTGGACGGAATGGAGGAGCTTTTGGATTCAGGCATTGACGTCAATTACAAAGACATTGACGGCCGCACCGCCTTGCACGTCGCCGCATGTCACTCTCTCACTCATGTCGTTGACTTGTTGCTCCAAAGAGGTGCCAACGTTGACCCTCAAGATCGCTGGGGAAGCACGCCTCTATCTGATGCGATGTACTACAAAAACCATGACGTTGTCAAACTCTTGGAGAAACATGGTGCAAAACCCCTGATGGTACCCATGCATGTCAAAAGTGCTCGTGAAGTACCAGAATATGAGATTGATCCTTCTGAACTTGATTTTACAAATAGTGTGTGCATAACAAAGGGAACTTATAGTATTGCATTATGGCGTGGAATTCAAGTTGCTGTCAAAACACTGGGGGAGGAAGTGTTTACTGATGAAGATAAAGTAAAAGCATTTCTTGATGAGCTCACTTTACTTCAGAAAATACGGCATCCAAATGTAGTCCAGTTTTTAGGTGCCGTAACACAAAGCACACCAATGACGATTATCACAGAATATCTACCCCAGGGAGATCTTCGTGCCTACTTGAAACGGAAAGGTGCTTTAAAACCGATAACAGCTGTTAAGTTTGCACTTGACATTGCTAGGGGGATGAATTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATACTGCGGGATGATTCTGGACATCTGAAAGTTGCAGACTTTGGAGTCAGCAAGTTGCTTAAAGTTGCAAAAACTGTCAAAGAAGACAAACCGGTGACATCCCAGGATACGTCATGGCGCTATGTTGCTCCAGAGATCTATAGAAATGAGGAATATGACACCAAGGTGGATGTGTTTTCATTTGGTCTGATATTGCAGGAGATGATTGAAGGTTTTCCACCGTTTTATCAAAATCCAGAAAATGAAGTTCCTAAGGCTTATGTTGAGAATGAGCGACCACCATTTAAAGCTCCACCCAAGCATTATGCTTATGGACTAAAACAGTTAATTGAAGAATGTTGGGATGAAAAACCTTCCAGAAGACCAACATTTAGGCAAATAATTGAGATATTGGAAGACACCAACTACCGTCTTGCTCCAAAAGGGGGCTTGAAGGCTTGCACTCCTACATGCATCCAGAATCTGAAGGGCCTTTTTAAGGGGTATCGCACAAGTCCAACTAGTAAATCATCTTGCCCTACAATCAGATAA 1389 0.4413 MESPSNKLQRRFSVGRQSSLMPERSNDGSTYDGSSVSEAALDPAVGLMYMANEGDLDGMEELLDSGIDVNYKDIDGRTALHVAACHSLTHVVDLLLQRGANVDPQDRWGSTPLSDAMYYKNHDVVKLLEKHGAKPLMVPMHVKSAREVPEYEIDPSELDFTNSVCITKGTYSIALWRGIQVAVKTLGEEVFTDEDKVKAFLDELTLLQKIRHPNVVQFLGAVTQSTPMTIITEYLPQGDLRAYLKRKGALKPITAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKLLKVAKTVKEDKPVTSQDTSWRYVAPEIYRNEEYDTKVDVFSFGLILQEMIEGFPPFYQNPENEVPKAYVENERPPFKAPPKHYAYGLKQLIEECWDEKPSRRPTFRQIIEILEDTNYRLAPKGGLKACTPTCIQNLKGLFKGYRTSPTSKSSCPTIR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0103 462 Pfam Protein tyrosine and serine/threonine kinase 177 417 IPR001245 GO:0004672|GO:0006468
Lan11g0103 462 Gene3D Transferase(Phosphotransferase) domain 1 236 428 - -
Lan11g0103 462 PIRSF ILK 2 434 - -
Lan11g0103 462 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 12 443 - -
Lan11g0103 462 Gene3D Phosphorylase Kinase; domain 1 153 235 - -
Lan11g0103 462 SUPERFAMILY Ankyrin repeat 46 138 IPR036770 -
Lan11g0103 462 SMART ANK_2a 42 71 IPR002110 GO:0005515
Lan11g0103 462 SMART ANK_2a 75 104 IPR002110 GO:0005515
Lan11g0103 462 SMART ANK_2a 108 137 IPR002110 GO:0005515
Lan11g0103 462 SUPERFAMILY Protein kinase-like (PK-like) 159 418 IPR011009 -
Lan11g0103 462 Gene3D - 9 150 IPR036770 -
Lan11g0103 462 CDD STKc_MAP3K-like 166 417 - -
Lan11g0103 462 PRINTS Tyrosine kinase catalytic domain signature 232 245 IPR001245 GO:0004672|GO:0006468
Lan11g0103 462 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
Lan11g0103 462 PRINTS Tyrosine kinase catalytic domain signature 342 364 IPR001245 GO:0004672|GO:0006468
Lan11g0103 462 PRINTS Tyrosine kinase catalytic domain signature 388 410 IPR001245 GO:0004672|GO:0006468
Lan11g0103 462 MobiDBLite consensus disorder prediction 1 36 - -
Lan11g0103 462 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 443 - -
Lan11g0103 462 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Lan11g0103 462 Pfam Ankyrin repeats (3 copies) 47 135 IPR002110 GO:0005515
Lan11g0103 462 ProSiteProfiles Protein kinase domain profile. 125 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0103 462 ProSiteProfiles Ankyrin repeat region circular profile. 75 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0103 Lan-Chr11 590459 596685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0103 9 440 MAP Kinase Kinase Kinase AT4G18950 64.516 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lan11g0103 PK_Tyr_Ser-Thr 1.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0103 - - gmx:100795964 742.651