Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0084 ATGGAAGGTGTTGTTGAGAGAAGAGTCATTCCCTCAGATAATAGTTGCCTATTTAATGCAGTTGGATATGTTATGGATCATGACCCAAAAAAGGCTTCTGAGTTGAGACAGGTTATAGCTGCCACAGTAGCAAGTGACCCAGATAAATTTTCTGAAGCATTTCTTGGGAAGCCAAATGCAGAGTATTGTAGTTGGATTCTTGACCCAGAGAAGTGGGGAGGTGCAATTGAACTTTCAATATTAGCAGAGTATTATGGACGTGAAATCGCAGCATATGATATTCAGACAACACGATGTGATTTGTATGGCCAGGGAAAAAATTATTCTGAAAGAGTTATGCTGATTTATGATGGTCTCCACTACGACGCTTTAGCTATGTCTCCCTTTGAAGGAGCTCCTGAGGAGTTTCATCAGACCATATTTGCTGTACAGAATGACAGAACCATTGGACCTGTTGAGGGGCTTGCTCTTAATTTTGCGAAGGAGCAACATAGGAAAAAGAGTTACACTGACACCTCCAACTTTACTCTACGATGTGGGGTGTGCCAAATTGGAGTAATTGGTCAGAAGGAAGCAGTGGAGCATGCTCGAACTACCGGTCATGTTAACTTCCAAGAATATAGCTGA 627 0.4195 MEGVVERRVIPSDNSCLFNAVGYVMDHDPKKASELRQVIAATVASDPDKFSEAFLGKPNAEYCSWILDPEKWGGAIELSILAEYYGREIAAYDIQTTRCDLYGQGKNYSERVMLIYDGLHYDALAMSPFEGAPEEFHQTIFAVQNDRTIGPVEGLALNFAKEQHRKKSYTDTSNFTLRCGVCQIGVIGQKEAVEHARTTGHVNFQEYS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0084 208 Pfam OTU-like cysteine protease 12 98 IPR003323 -
Lan11g0084 208 Gene3D - 1 173 - -
Lan11g0084 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Lan11g0084 208 PANTHER UBIQUITIN THIOESTERASE OTU1 7 206 - -
Lan11g0084 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 7 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Lan11g0084 208 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0084 Lan-Chr11 480638 484450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0084 1 207 C2H2 Transcription Factor Family AT1G50670 78.744 1.76e-127 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0084 K13719 - zju:107432084 384.03