Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0083 ATGCCTATTATCAACACTTTTCTAACTATGATGACCAAGTGGTTTTCTGTAATAGTAGAAGCAGTAACAAAGTTTAAGGAATACTTTTCTTCACCAGTTTTGGCTGCCATTTGTGGTTCTGCATTTACATCATTCATGGTAGTTTTGGAGAGAGTTCTTTTTGCTGCACTTATTTGCATTCTGGCACTTGGAGGGTCAATAATAGGAACAATTGCAGGAGGCATCAGAGGTAGAACCACAGTAGATGGTTTTTTTGGTGGTGCTGGCAAGGGAGCAGTTATAGGAGCCATTGCAGCCCTAGAATTGGTTAATAATGCTGCTAATGGTGAACCATTACCAGAGGTTCCCATGTTAAGCACTTTTTTTAATGCCAACATGATTATAGAATGGATGTGTTCAGCTGCTTCACGTGCCTATGATTTGCATTTTCAGATGAATATATCGGAATCAAGTTACGGAGAAGTAACAGATATTGATGATAGTGATGGAGTGCCCCGAAGTTGTATTGAAAATCTTCCTTCTGAGGAATACAACTCAAGCAAAATGTTGAAACTGTACGATAAGATAAGTTGTTCAATTTGCTTACAGGATTTTGAGGATGGAGAAATGGTGAGGATACTTCCAAAATGTGGCCACATTTTTCATCTAGAATGCATAGACAAATGGCTAATCCGACAAGAATCATGTCCAATGTGTAGAACTTGTGTTCTTGATCATTTTTATTAA 726 0.3802 MPIINTFLTMMTKWFSVIVEAVTKFKEYFSSPVLAAICGSAFTSFMVVLERVLFAALICILALGGSIIGTIAGGIRGRTTVDGFFGGAGKGAVIGAIAALELVNNAANGEPLPEVPMLSTFFNANMIIEWMCSAASRAYDLHFQMNISESSYGEVTDIDDSDGVPRSCIENLPSEEYNSSKMLKLYDKISCSICLQDFEDGEMVRILPKCGHIFHLECIDKWLIRQESCPMCRTCVLDHFY* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0083 241 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 18 236 IPR044523 -
Lan11g0083 241 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 18 236 - -
Lan11g0083 241 Pfam Ring finger domain 190 233 IPR001841 -
Lan11g0083 241 SUPERFAMILY RING/U-box 183 237 - -
Lan11g0083 241 ProSiteProfiles Zinc finger RING-type profile. 191 233 IPR001841 -
Lan11g0083 241 CDD RING-H2_PA-TM-RING 191 233 - -
Lan11g0083 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 152 237 IPR013083 -
Lan11g0083 241 SMART ring_2 191 232 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0083 Lan-Chr11 476036 478264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0083 53 233 C3H Transcription Factor Family AT5G66070 34.359 3.09e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0083 - K19041 gmx:100305612 213.001