Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0080 ATGGTTGATTTGGGAATTCAGATTCCTACAAGTTTTGATCCATTTGCTGAAGCGAAAGAATCAGATGCTCCAGGTGCAAAAGAGTATGTACATATCCGCATACAACAAAGGAATGGAAAGAAGAGCTTGACAACAGTGCAAGGGCTGAAGAAAGAGTTCAGCTATGAGAAGATCCTCAAAGATCTAAAGAAAGAGTTTTGTTGCAATGGCAATGTTGTGAATGATAAGGAGCTTGGAAAGATTATTCAACTTCAAGGTGATCAGCGTAAGAGTGCTTCTCATTTCCTTGTTCAGGCTGGTCTTGTTAGGAAGGATCAAGTCAAGATTCATGGTTTTTGA 339 0.3953 MVDLGIQIPTSFDPFAEAKESDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKEFCCNGNVVNDKELGKIIQLQGDQRKSASHFLVQAGLVRKDQVKIHGF* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0080 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Lan11g0080 112 Gene3D - 2 112 - -
Lan11g0080 112 SUPERFAMILY eIF1-like 3 112 IPR036877 GO:0003743|GO:0006413
Lan11g0080 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Lan11g0080 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Lan11g0080 112 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 112 IPR005874 GO:0003743
Lan11g0080 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 112 - -
Lan11g0080 112 PIRSF Transl_init_SUI1_Euk 2 112 IPR005874 GO:0003743
Lan11g0080 112 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0080 Lan-Chr11 463916 464420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0080 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 82.143 8.14e-68 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0080 K03113 - gmx:100791423 212.231