Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0077 ATGATTTCTGTTAGGTGTGCAGCTTGCAAGAGTCAAAGAAGGAGGTGCCCTTCAGATTGCATTTTCTCTCCATATTTCCCTCCTAATGATCCTCAAAAGTTTGCTTATGTTCATAAAATATATGGTGGTAGCAATGTTGGAAAAATGCTTCAGCAAATACCACCCTATGCACGAAAACAAGCTGTGGATACATTGTACTTAGAAGCAAAATGTAGGATTGAAGACCCTACTTATGGGTGTGCTGGAATTATATTTAGATTGTATCAACATATTCATGAGATAGAGGTAGAGCTAGCCAAAATCCAAACTCAAATTGCTTTCCACAACCTCCAAAATCCACATGTTGAAGTTGAATCAAATTTCAATGCTTTCTCAACAATTGAAGCTGAATCAAACTTGAACATCTTGCCACCACAAAGTAGCATGGGTCAGTTTCAATATGATCACTCAAATCAATCACCTTGGTTCTATTAG 474 0.3734 MISVRCAACKSQRRRCPSDCIFSPYFPPNDPQKFAYVHKIYGGSNVGKMLQQIPPYARKQAVDTLYLEAKCRIEDPTYGCAGIIFRLYQHIHEIEVELAKIQTQIAFHNLQNPHVEVESNFNAFSTIEAESNLNILPPQSSMGQFQYDHSNQSPWFY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0077 157 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Lan11g0077 157 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Lan11g0077 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 116 - -
Lan11g0077 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0077 Lan-Chr11 448057 448689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0077 5 106 AS2 family AT3G26660 64.706 4.38e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan11g0077 LOB 2.1e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1312 2 23980283 23981923 Lan11g0077 11 448057 448689 LSH