Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0072 ATGGCTGCTACATGGAATGATGCCATTGCCTTGGGTGATGACTCTACTGCCTCACATTCTAATTCACTAGTCATGTCGTTTAGTGAGAAACGACTACCCTTGCATGAGGTGGATTTCTTTGCTCAGAATAATGAGAAAAAGAGCCATGATGATCATCATAAAATGGTGCAGCATATAGAGCTTAGTGAAGATACTAGTTTAGATCTACAAATGAAGAATACGGGTGGCAAAAGATCAATAAAGAAATACGGGGATGAGAGAAATGAGCTTGCTGCATTGGTAGCTGAATTGCACGATATGAATGCTGAAAATCATCGTTTGAGAGTGCTGGTTGATCAAGTCAACAATGACTACAATGCCCTACACATGCAACTTATTAAGCTGATGCAGACACAGCATAGAAATAGGGGTGACCAAGCCATAGAGAAGAAGGGTAAGAAAGAAGGTATGGTTCCAAGGCAATTTTTAGAGATGGGTGGTTTTTCTGAAAGGGATAAGGCTTTCCAACAATATTTAGAGGGAAGCAAACTAAGAGAAAGCAAAAGCATGATTGAGTTGATGGAGAGCAATACTGTTCAAGCATTGGAACCAACTAAGGATAATAGCTCAAAAGCAAGAACAATGGAGGAGAATCCAGGTGACCAAGCATTCCAAGGGTGTCTCTCTAACAAAGTTCCTAAGTTGAATTCTTTAATGGGTCATGTTGATCAAGCATCTGAAACCATGGCAATCATCAAGAAAGCTCGTGTATCAGTTCGAACAAGATCAGAATCTTCAATGATAGCAGATGGATGCCAATGGAGAAAGTATGGGCAGAAGATGGCGAAAGGGAATCCATGTCCACGAGCTTATTATCGTTGCACCATGTGTACTGGTTGTCCAGTAAGAAAACAAGTACAAAGGTGTGGTGAAGATAGGAGTGTGTTGATCACAACTTATGAAGGGCAACATAACCATCCACTCCCTCCAACTGCAATGGCAATGGCATCAACAACATCAGCAGCAGCATCAATGCTTCTTTCAGGATCAATGCCTAGCGCTGATGGCCTAATTAATCCAACCATATTAGAAAGTGCTGCATTTCCATGCTCACACAACAACATGGCTACTCTTTCTGCCTCAGCTCCATTTCCAACTATTACATTAGATCTCACTAAACAAAGTGATACCAATTCCTCATCACAGTTACAAAGGGACCAACTTAGCCTCCTAGCTCCACTTCTGTCTGAGAAGTTTATGTCAGTTAATCCATCACTTACTGACACTGTTAATGCAGCTACGGCTGCTATCACAGCAGACCCCAATTTCACATCAGCTCTTGTGGCTGCTATAACATCTATCATTGGAACTTCACATCCAAACAACAATGGTAACTATAATACAAGTGGAGATCAGCAGTGCAATAACGCATAA 1413 0.4133 MAATWNDAIALGDDSTASHSNSLVMSFSEKRLPLHEVDFFAQNNEKKSHDDHHKMVQHIELSEDTSLDLQMKNTGGKRSIKKYGDERNELAALVAELHDMNAENHRLRVLVDQVNNDYNALHMQLIKLMQTQHRNRGDQAIEKKGKKEGMVPRQFLEMGGFSERDKAFQQYLEGSKLRESKSMIELMESNTVQALEPTKDNSSKARTMEENPGDQAFQGCLSNKVPKLNSLMGHVDQASETMAIIKKARVSVRTRSESSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMCTGCPVRKQVQRCGEDRSVLITTYEGQHNHPLPPTAMAMASTTSAAASMLLSGSMPSADGLINPTILESAAFPCSHNNMATLSASAPFPTITLDLTKQSDTNSSSQLQRDQLSLLAPLLSEKFMSVNPSLTDTVNAATAAITADPNFTSALVAAITSIIGTSHPNNNGNYNTSGDQQCNNA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0072 470 Coils Coil 83 103 - -
Lan11g0072 470 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0072 470 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 16 458 - -
Lan11g0072 470 SUPERFAMILY WRKY DNA-binding domain 253 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g0072 470 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 458 IPR044810 GO:0003700
Lan11g0072 470 Gene3D WRKY domain 246 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g0072 470 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0072 470 MobiDBLite consensus disorder prediction 197 217 - -
Lan11g0072 470 Pfam WRKY DNA -binding domain 263 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0072 Lan-Chr11 415694 418565 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0072 36 458 WRKY Transcription Factor Family AT1G62300 44.124 4.35e-95 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan11g0072 WRKY 2.7e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0072 - - adu:107496306 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1324 2 24057034 24060772 Lan11g0072 11 415694 418565 LSH
Lan2g1272 2 23706791 23708677 Lan11g0072 11 415694 418565 PCT
Lan9g1447 9 21296033 21298343 Lan11g0072 11 415694 418565 PCT
Lan2g1324 2 24057034 24060772 Lan11g0072 11 415694 418565 PCT
Lan11g0072 11 415694 418565 Lan2g1324 2 24057034 24060772 PCT