Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0071 ATGGCTGCTACATGGAATGATGCCATTGCCTTGGGTGATGACTCTACTGCCTCACATTCTAATTCACTAGTCATGTCGTTTAGTGAGAAACGACTACCCTTGCATGAGGTGGATTTCTTTGCTCAGAATAATGAGAAAAAGAGCCATGATGATCATCATAAAATGGTGCAGCATATAGAGCTTAGTGAAGATACTAGTTTAGATCTACAAATGAAGAATACGGGTGGCAAAAGATCAATAAAGAAATACGGGGATGAGAGAAATGAGCTTGCTGCATTGGTAGCTGAATTGCACGATATGAATGCTGAAAATCATCGTTTGAGAGTGCTGGTTGATCAAGTCAACAATGACTACAATGCCCTACACATGCAACTTATTAAGCTGATGCAGACACAGCATAGAAATAGGGGTGACCAAGCCATAGAGAAGAAGGGTAAGAAAGAAGGTATGATTGAGTTGATGGAGAGCAATACTGTTCAAGCATTGGAACCAACTAAGGATAATAGCTCAAAAGCAAGAACAATGGAGGAGAATCCAGGTGACCAAGCATTCCAAGGGTGTCTCTCTAACAAAGTTCCTAAGTTGAATTCTTTAATGGGTCATGTTGATCAAGCATCTGAAACCATGGCAATCATCAAGAAAGCTCGTGTATCAGTTCGAACAAGATCAGAATCTTCAATGATAGCAGATGGATGCCAATGGAGAAAGTATGGGCAGAAGATGGCGAAAGGGAATCCATGTCCACGAGCTTATTATCGTTGCACCATGTGTACTGGTTGTCCAGTAAGAAAACAAGTACAAAGGTGTGGTGAAGATAGGAGTGTGTTGATCACAACTTATGAAGGGCAACATAACCATCCACTCCCTCCAACTGCAATGGCAATGGCATCAACAACATCAGCAGCAGCATCAATGCTTCTTTCAGGATCAATGCCTAGCGCTGATGGCCTAATTAATCCAACCATATTAGAAAGTGCTGCATTTCCATGCTCACACAACAACATGGCTACTCTTTCTGCCTCAGCTCCATTTCCAACTATTACATTAGATCTCACTAAACAAAGTGATACCAATTCCTCATCACAGTTACAAAGGGACCAACTTAGCCTCCTAGCTCCACTTCTGTCTGAGAAGTTTATGTCAGTTAATCCATCACTTACTGACACTGTTAATGCAGCTACGGCTGCTATCACAGCAGACCCCAATTTCACATCAGCTCTTGTGGCTGCTATAACATCTATCATTGGAACTTCACATCCAAACAACAATGGTAACTATAATACAAGTGGAGATCAGCAGTGCAATAACGCATAA 1314 0.4155 MAATWNDAIALGDDSTASHSNSLVMSFSEKRLPLHEVDFFAQNNEKKSHDDHHKMVQHIELSEDTSLDLQMKNTGGKRSIKKYGDERNELAALVAELHDMNAENHRLRVLVDQVNNDYNALHMQLIKLMQTQHRNRGDQAIEKKGKKEGMIELMESNTVQALEPTKDNSSKARTMEENPGDQAFQGCLSNKVPKLNSLMGHVDQASETMAIIKKARVSVRTRSESSMIADGCQWRKYGQKMAKGNPCPRAYYRCTMCTGCPVRKQVQRCGEDRSVLITTYEGQHNHPLPPTAMAMASTTSAAASMLLSGSMPSADGLINPTILESAAFPCSHNNMATLSASAPFPTITLDLTKQSDTNSSSQLQRDQLSLLAPLLSEKFMSVNPSLTDTVNAATAAITADPNFTSALVAAITSIIGTSHPNNNGNYNTSGDQQCNNA* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0071 437 Pfam WRKY DNA -binding domain 230 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0071 437 Coils Coil 83 103 - -
Lan11g0071 437 Gene3D WRKY domain 213 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan11g0071 437 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 16 145 - -
Lan11g0071 437 PANTHER WRKY TRANSCRIPTION FACTOR 6-LIKE 162 425 - -
Lan11g0071 437 ProSiteProfiles WRKY domain profile. 223 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0071 437 SMART WRKY_cls 228 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan11g0071 437 MobiDBLite consensus disorder prediction 164 184 - -
Lan11g0071 437 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 145 IPR044810 GO:0003700
Lan11g0071 437 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 162 425 IPR044810 GO:0003700
Lan11g0071 437 SUPERFAMILY WRKY DNA-binding domain 220 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0071 Lan-Chr11 410458 413312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0071 36 425 WRKY Transcription Factor Family AT1G62300 43.882 5.67e-93 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan11g0071 WRKY 2.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0071 - - cam:101500503 400.979