Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0046 ATGCCGAGTGTTACTATTGACCCTTGTGACAAAGACTCTGAGCCATTCGTTGAAATTGATCCAACTGGTCGCTATGGTAAATATAGTGAGCTACTTGGATGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAAGAAGAAGGAATAGAAGTAGCTTGGAACCAAGTCAAACTCAGCAACTTTTGTGATGATCCTGCAATGATGGATAGGCTTTATTCTGAAGTAAGGTTGCTCAGAAGCTTGACCAACAAAAACATCATTGCCCTTTATAATGTATGGAAGGATGAGAACAAAAACACACTCAATTTCATCACCGAGGTTTGTACTAGTGGCGATTTGAGGGAGTACAGGAAGAAGCATAAACATGTTTCCATGAAGGCACTTAAGAAGTGGTCTAAGCAGATTTTGAATGGGTTGAATTATTTGCATATGCATGACCCATGTATCATCCATAGAGATCTCAATTCCAGTAATGTCTTTGTCAACGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGGAAGAACCATATTGCACATTCAATTCTAGGCACACCAGAATTCATGGCTCCAGAATTATATGATGAAGACTACACAGAATTGGTGGACATATATTCATTTGGGCTGTGTGTATTAGAGATGGTGACATTGGAGATTCCTTATAGTGAGTGTGACAGTGTTGCAAAGATATACAAAAAGGTAACTTCTGGAGTGAGACCTGGGGCCTTGAACAAGGTCAAAGATGCAGAAGTGAAGGGCTTCATTGAGAGGTGTCTTGCTCAACCAAGATCAAGACCTTCTGCTGCTCAACTTCTCAAAGATTCTTTCTTTGATGAGCTTGCTCAAGATGATGACGAAAATGATGATTCTTCTTGTTCATACTAA 906 0.4062 MPSVTIDPCDKDSEPFVEIDPTGRYGKYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLSNFCDDPAMMDRLYSEVRLLRSLTNKNIIALYNVWKDENKNTLNFITEVCTSGDLREYRKKHKHVSMKALKKWSKQILNGLNYLHMHDPCIIHRDLNSSNVFVNGNTGQVKIGDLGLAAIVGKNHIAHSILGTPEFMAPELYDEDYTELVDIYSFGLCVLEMVTLEIPYSECDSVAKIYKKVTSGVRPGALNKVKDAEVKGFIERCLAQPRSRPSAAQLLKDSFFDELAQDDDENDDSSCSY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0046 301 Gene3D Transferase(Phosphotransferase) domain 1 109 290 - -
Lan11g0046 301 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Lan11g0046 301 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0046 301 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Lan11g0046 301 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 301 - -
Lan11g0046 301 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan11g0046 301 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 1 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0046 Lan-Chr11 287185 288346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0046 10 285 MAP Kinase Kinase Kinase AT5G55560 80.797 6.09e-175 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan11g0046 Pkinase 9.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0046 K08867 - gmx:100816060 527.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1344 2 24189401 24191841 Lan11g0046 11 287185 288346 LSH
Lan2g1344 2 24189401 24191841 Lan11g0046 11 287185 288346 PCT
Lan11g0046 11 287185 288346 Lan2g1344 2 24189401 24191841 PCT