Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0041 ATGGAGCTTCAAAACCCTTTCACTATTTTGTTTACATCATTTCTCTTTCTATTCTTGTTACTAGAAATAGTTAAGAGATCCAGTTCAAAGAATTCCTATACAAACTTACCACCAGGGCCATGGAAACTACCCTTCATAGGTAACATACACCAATTTGTTGGGTCAATGCCCCATCACTCCATGAGAGATTTAGCAGCCAAGTATGGTCCTATAATGCACCTAAAACTAGGAGAAGTTTCCAACATCATAGTTAGTTCAGCAGAAATTGCTAGCCAGATTATGAAAACACATGATGCCAATTTTTCTTACAGGCCAGAGAGTCTTTTTGCCAAAATATTTTCTTATAATGCTTCAGACATTGAATTCTCTCAATATGGAGATTATTGGAGGCAACTAAGAAAGATATGCACCGTCGAGTTGCTATCAGCAAAACGTGTTCAATCATTCAGGTTCATAAGAGAAGAGGAAGTGTCAAAACTTGCTAAAATAATATGTACAAGTGAGGGGTCCATTGTGAATCTGTCTCCTATGATTTCCTCATTGTTGCATGGGATATCAGCACGATCAGCTTTTGGTAAAATAAATAAAAATCAGAAAATATTGATATCAGCAATTGAGGAAGGAATTTTTCTAGCAGGAGAACTATGGGTTAGTGAATTCTATCCCTCATTAACAGTGCTTCAAAAGTTGAGTAAGACAAAGGCTAAACTTGAAAAGTTGCACATAGAGGCTGATAAAATATTGCAAGAGATTCTTGATGATCACAAAAATAAAAAAAGCAGTGAGAGTGAAGATCTAATAGATGTTCTTCTCAAGTTTCAAAATGACAAGGATTCTCAACCTCCCTTAACTGATGACAATATTAAAGCAATTGGCCAGGAGATGTTTGGTGGTGGTGGTGAAACAACATCAAGTACTGTTGTGTGGTGTTTGTCAGAAATGATAAAGAAACCAAAAGTGATGGAAGAAGCACAAGCTGAGGTAAGAAAAGTGTATGATAATAAAGGATATGTGGATGAGTCAGAGTTGCACCAATTGATATATTTGAAGGCAGTGATCAAAGAAACACTGAGGCTCCACCCACCTGTCCCATTGTTAATGCCAAGAGAAAATAAAGATAGCAGCAAAATCAATGGATATGATATACCACCTAAGTGCAAGGTCTTAATAAATGCTTTTGCTATTGGAAGAGATCCTAAGTATTGGAATGAACCTGAAAGCTTTAATCCTGAGAGATTTCTGAATAGTTCAGTAGATTATAAGGGCACAGACTTTGAGTTTATACCATTTGGTGCTGGAAGGAGGATATGCCCTGGTATTACATTTGCCATACCAAACATGGAGCTTCCACTTGCAACATTGCTTTACCATTTTGATTGGAAGCTTCCAAATGGAATGAAGAATGAAGAACTTGATATGGATGAATCATCTGGGTTGGCTATTAAAAGAAAAAATGATCTTTGCTTGATTCCAATTGTTACTCGTATGCCTTAA 1494 0.3661 MELQNPFTILFTSFLFLFLLLEIVKRSSSKNSYTNLPPGPWKLPFIGNIHQFVGSMPHHSMRDLAAKYGPIMHLKLGEVSNIIVSSAEIASQIMKTHDANFSYRPESLFAKIFSYNASDIEFSQYGDYWRQLRKICTVELLSAKRVQSFRFIREEEVSKLAKIICTSEGSIVNLSPMISSLLHGISARSAFGKINKNQKILISAIEEGIFLAGELWVSEFYPSLTVLQKLSKTKAKLEKLHIEADKILQEILDDHKNKKSSESEDLIDVLLKFQNDKDSQPPLTDDNIKAIGQEMFGGGGETTSSTVVWCLSEMIKKPKVMEEAQAEVRKVYDNKGYVDESELHQLIYLKAVIKETLRLHPPVPLLMPRENKDSSKINGYDIPPKCKVLINAFAIGRDPKYWNEPESFNPERFLNSSVDYKGTDFEFIPFGAGRRICPGITFAIPNMELPLATLLYHFDWKLPNGMKNEELDMDESSGLAIKRKNDLCLIPIVTRMP* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0041 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Lan11g0041 497 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 Pfam Cytochrome P450 37 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 Coils Coil 230 250 - -
Lan11g0041 497 SUPERFAMILY Cytochrome P450 37 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PANTHER CYTOCHROME P450 71D10 10 494 - -
Lan11g0041 497 Gene3D Cytochrome P450 35 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan11g0041 497 PANTHER CYTOCHROME P450 71B11-RELATED 10 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0041 Lan-Chr11 258209 260308 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0041 9 491 Cytochrome P450 AT3G26300 40.162 2.02e-128 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0041 - - gmx:606548 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0041 11 258209 260308 Lan9g1492 9 21563955 21565626 LSH
Lan9g1492 9 21563955 21565626 Lan11g0041 11 258209 260308 PCT