Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0027 ATGACGGAAAATGGAAGAGAGGATGAGATTGAGGACATGTCAATGTCACCACCTTCTGTGGGTTCCATGCAGATAGCAGGGAGCAATGGGTTTGGTCACAGTATGGAGTTCATGTCTCAGGCATACCTTCCTAATAGGTACTCACAGATTGACATCAAACTTGAGGATTCCAATTTCAACCAACAACCTCCCCTCCCTATATATCTTAAGTTTGAAGATGTAGAGTATAAGGTGAGAAATAGCGAAGCTGCTTCCGATAATCCTGTGAAGACAATGGTGTCAAAGGTGGCCACTCAACATATGAGAGAAGATAGATACAAGAAAATTTTGAAGGGTATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGCAGTGGGAAGACAACCTTGTTGAGAGTAATAGGAGGAAGATTAGTCGACAATGTAAAGGGAAATATAACTTACAATGATGTTCGATATAATCCCGCAGTCAAGCAGAGGATTGGATTTGTGATGCAAGAGGATGTGCTTTTCCCACAACTTACAGTAGAAGAGACATTAATCTTCTCTGCATTCTTAAGGTTGCCAACCAACATGAGCAAGCAACAAAAATATGCAAGAGTAGAGACCACTATCAAGGAACTAGGACTTGAAAGATGTCGCCACACAAAATTAGGTGGAGGATTTCTCAAAGGCATATCAGGAGGAGAGAGGAAGAGAACCAGCATAGGCTATGAAATTCTTGTTGATCCTTCATTGCTGCTACTTGATGAACCAACTTCGGGCCTTGATTCCACCTCAGCAAATAGACTACTTCTCACTCTTCAAGGACTTGCCAAGACTGGAAGGACCATAATCACAACAATTCACCAGCCATCAAGTAGAATCTTTCACATGTTTGACAAACTTCTTCTAATATCAGAAGGCTATCCTATTTACTATGGGAAGGCTAGAGAGTCAATTGAGTACTTTTCATCCTTGAGTTTCATCCCGGAAATACCAATGAATCCTGCAGAGTTCATGCTTGACTTGGCAACTGGGCAAGTGAATGACATAAGTGTTCCACAAGATATTCTGAAAGATCAAGAATCTGCTGACACGTCAACAGCTGTTATTAACTATCTGCAACTGAAGTATAAAGATACACTGGAGCCAAAAGAAAAAGAAGAGAATCATGGAGCAGCAAACACACCTGAAAATCTTCAACTAGCCATTCAGGTTAAAAAGGAATGGACATTGAGTTGGCCAGACCAATTCATCATTCTTTATAAGAGAACATTTAGAGCAAGATGCAAGGACTACTTTGATAAATTAAGACTAGTCCAAGCATTTGGAATTGCACTTTTGTTGGGGATGCTTTGGTGGAAATCTTCAACCAATACAGAAGCTCAACTCAGAGATCAGGTTGGTTTAATGTTCTATATCTGCATATATTGGACATCCTCCTGTATTTTCGGAGCAGTCTATGTCTTTCCATTTGAAAAGGTTTACTTGGTGAAAGAAAGGAAAGCAGACATGTACGGATTAAGTGTATACTATGCATGTAGCACCTTATGTGACATGGTGGCACATATTTTCTATCCTACTTTTTTCATGTGCATCCTATACTTCATGGCTGGCTTTAAGAGAACTGTGGCATGCTTCTTCCTTACGTTGTTTGCGGTGCAGTTGATAGCTATTACTAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGTATTCAAAGAGCAGGGATGGTAGCTTCTTTGATACTAATGTTGTTCCTTCTTACAGGTGGTTACTATGTCCAGCACATACCAAAGTTCATGCAGTGGTTAAAGTATTTGTCATTCTTGTACTATGGATTTAGACTTCTTCTAAAAGTGCAGTATTCAGGAGATGAACTATATGAATGTGAAAGCAAGGGAGGGTGTAGGCCATTGCAGAGTTCACCTTCATTTGACACTGTAAACTTGAAAGGAGGCTTAACAGAAGTATGGATTCTGCTAGCCATGGCTCTATGCTTCCGCTTTTTTGCTTACTTTTGTCTCCGCAAAAGAATTGATGTCACCAATTAG 2061 0.4056 MTENGREDEIEDMSMSPPSVGSMQIAGSNGFGHSMEFMSQAYLPNRYSQIDIKLEDSNFNQQPPLPIYLKFEDVEYKVRNSEAASDNPVKTMVSKVATQHMREDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGNITYNDVRYNPAVKQRIGFVMQEDVLFPQLTVEETLIFSAFLRLPTNMSKQQKYARVETTIKELGLERCRHTKLGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLLTLQGLAKTGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARESIEYFSSLSFIPEIPMNPAEFMLDLATGQVNDISVPQDILKDQESADTSTAVINYLQLKYKDTLEPKEKEENHGAANTPENLQLAIQVKKEWTLSWPDQFIILYKRTFRARCKDYFDKLRLVQAFGIALLLGMLWWKSSTNTEAQLRDQVGLMFYICIYWTSSCIFGAVYVFPFEKVYLVKERKADMYGLSVYYACSTLCDMVAHIFYPTFFMCILYFMAGFKRTVACFFLTLFAVQLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYLSFLYYGFRLLLKVQYSGDELYECESKGGCRPLQSSPSFDTVNLKGGLTEVWILLAMALCFRFFAYFCLRKRIDVTN* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0027 686 Pfam ABC-2 type transporter 289 350 IPR043926 GO:0140359
Lan11g0027 686 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Lan11g0027 686 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 332 IPR003439 GO:0005524
Lan11g0027 686 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Lan11g0027 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 5 682 - -
Lan11g0027 686 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 324 IPR027417 -
Lan11g0027 686 CDD ABCG_EPDR 66 314 - -
Lan11g0027 686 SMART AAA_5 119 310 IPR003593 -
Lan11g0027 686 Gene3D - 93 326 IPR027417 -
Lan11g0027 686 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 5 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0027 Lan-Chr11 189878 193233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0027 108 293 Calmodulin-binding Proteins AT2G36910 31.122 2.74e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0027 K05681 - gmx:100815259 1222.22