Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0023 ATGAACAACAACAACAACAACACCGATTTGGTTGATTCTATGTACAGAGTTGAAACCATTTCTCGTTTCGCCCAATGGAAAATTCTCAACTTCCCTTCATGCACTTACCGCAAATCCGATCCTTTCAACATATCCATTTGGAATTGGTATTTATCAGTGGAGAGGAACAGAGTTTCATGTATTAAATTATACCCACAAATATCCAAACATAATCTCCCTATTGCATCTTTCATCATTCGCCTGCTTAGTTCTGCTGGAGATCACAAATCCTTGGCTCATTCAGAAACAAGAGAGAAATTGCTCAGCAACACTGAAGACTTTGTTTGGCTAATTGAAACTCCACTACCTGGGAAATTCATTATTGACATTGAGTTCCTGGATTTGAAGATTTCATGCCCAAAAGGTGGAGGAGACCCTTTCTCTATCTGGCCTAACAGATCTATGCTGCAAAGATCAAATGCCGCAAATCTGGAGTCTCTTGGGCGAATGCTAACAGAAGGAATCCACACAGACATCACAATACATGCTTGTGATGGAAGCATCTCAGACATGCCAATTGAAGCTTGCCAAGCATTTCTATATTATCTTTATGGGAACCTAAAACATGAAGAGTTTATGATGCATAGGCTGGCTCTTCTTCATGCAGCTGATAAGTATGATATATGTGACTTGAGAGAGGCATGCCATGAGAGTCTTTTACAAGATATTGATGAAAACAATGTACTTGACAGGCTCCAACATGCATGGTTATATCAATTACCAAACCTCAAGCTTGGCTGCATGCAATATCTTGTCAAATTTGGTAAAATATTTTACATTCAACATGATTTCACTGCCTTCTTGCAAAGTGCACACAGGGATTTGATTTCTCAACTCTTCCATCAAGTTCTTGATGCCTGCCAAGGACTCTGA 912 0.3947 MNNNNNNTDLVDSMYRVETISRFAQWKILNFPSCTYRKSDPFNISIWNWYLSVERNRVSCIKLYPQISKHNLPIASFIIRLLSSAGDHKSLAHSETREKLLSNTEDFVWLIETPLPGKFIIDIEFLDLKISCPKGGGDPFSIWPNRSMLQRSNAANLESLGRMLTEGIHTDITIHACDGSISDMPIEACQAFLYYLYGNLKHEEFMMHRLALLHAADKYDICDLREACHESLLQDIDENNVLDRLQHAWLYQLPNLKLGCMQYLVKFGKIFYIQHDFTAFLQSAHRDLISQLFHQVLDACQGL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0023 303 SUPERFAMILY POZ domain 156 235 IPR011333 -
Lan11g0023 303 Gene3D Potassium Channel Kv1.1; Chain A 158 271 IPR011333 -
Lan11g0023 303 PANTHER OS08G0495500 PROTEIN 12 181 - -
Lan11g0023 303 PANTHER OS08G0495500 PROTEIN 181 302 - -
Lan11g0023 303 PANTHER OS08G0495500 PROTEIN-RELATED 12 181 IPR044714 -
Lan11g0023 303 PANTHER OS08G0495500 PROTEIN-RELATED 181 302 IPR044714 -
Lan11g0023 303 Pfam BTB/POZ domain 176 234 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0023 Lan-Chr11 175760 177384 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lan11g0023 BTB 6.7e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0023 K10523 - gmx:100790186 384.03