Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0019 ATGGAAGCAAACAAAGAGGAGGCACTTAAGGCAATAGAGAATGCTGAGAAGCGATTTGCTCTGAGGGACTTCGCTGGTGCAAAAAGCTATGCTTTGAAGGCTAAAACCCTTTGTCCAGGATTGGAGGGTATATCTCAAATGGTGGCCACGTTTGAAGTTTACATTGCTTCTGAGGTCACACATGATGGTGAGTTGGACTATTATTCAATTCTCGGATTAAAACCTTCGGCTGATACACAGGCTGTGAAGAGACAGTATAAGAAGTTGGCAGTGTTGCTTCATCCAGATAAGAATAAATGCGTGGGAGCTGATGGGGCTTTTAAGCTTGTTTCCGAGGCATGGACTTGGCTTTCAGATAGTGCTATGCACAGTTCTTACAATATCAAGAGAAGTGCACAGTTTGGTGGGATTAATCACAAAAATATGTCTTCTGTTCATGCTACTGGTTATAACAAATGTTCCAATTCGTCAACATCTCATGGCAGCCTTGACACCTTTTGGACAATTTGCACCTCTTGCAAGGTTCAGTATGAGTATCTGCGCAAGTATGTGAATAAAAAACTTTCATGTAAGAACTGCCGTGCCACTTTTGTTGCTGTTGAAACTGGGGCAGCCCCTGCAAATGGTTCATTCCCATACTGTCCTTGGACATATATGCAAGGAAATGGGTATGGAAGCCATTCATATGATGGAGTTACATATGTTCCAACCAGTACCACCTATATCAATGGCAACGGAGTCACAGGATACCATTCTGGGCATGGGTATGAGTATGTTTCAAATGTTTCATTTCAGTGGGACTCTGCTGGACTTGTCAATCAAAATGGTTCAACTACCGTATCTGCTGGTTCTGTTCATCAGGTCAATGGAAATGTGAAGAGGGGAAGGCCAAAAGTCAAATCTGGAGTTGATGGAAGGCATCACGTTGCTGAGACTATGGTCACTATAAACTCAGATGTACCGTTCTCCTGCATTAAACCAGAAGAAGTTAAGCTAAGTAGACCTGATAAGAAACGGAAAGTTGTTGTGGGAGCTGGTTTCAGAAATGGCTCTGAAGACAAGGGGTCAAAATGTGCTTCAGAATCATTATTGGCTTGGGCACTATATGATGAGGAAGATGGAATGCCGCGCTTGTATTGTCTGATCCGTGAGATTATCTCTGTGAATCCATTTAAGATTCATATTAGTTACTTGGGTTCCAAAACTGATAGCGAGTTTGGTTTAGTAAACTGGATTGATTCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCTGTGAATTCTGATGTTGTTGAGCAAGTTAACATTTTTTCTCATGTTCTAAGCAAGGAGAAAGCTGGTCGAGGAGGATGCATTCGCATATATCCGAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACGAGAATGGGACAGATCTACTCCGGATGAAGTGAGGCATAAATATGAAATGGTGGAGGTGCTGGATGATTACTCTGAGGAACTTGGTGTTTGTGTTGCACCTCTTATTAAGTTAGCTGGATTTAAAACAGTGTATAAGGTGAATACAGACAAAAGCACCATTCAATGGATACCAAGAAGAGAAATGTTGCGTTTTTCGCACCAAGTTCCTTCATGGTTGCTGAAGGGTGAAGAGGCAAGCAATTTGCCTGAAAGGTGTTGGGATCTTGATCCGGCTGCGACTCCAGATGAACTTCTTCATGCTGCTACGACAGAAGCGAAGGCTTTGTAG 1737 0.4243 MEANKEEALKAIENAEKRFALRDFAGAKSYALKAKTLCPGLEGISQMVATFEVYIASEVTHDGELDYYSILGLKPSADTQAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLSDSAMHSSYNIKRSAQFGGINHKNMSSVHATGYNKCSNSSTSHGSLDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRATFVAVETGAAPANGSFPYCPWTYMQGNGYGSHSYDGVTYVPTSTTYINGNGVTGYHSGHGYEYVSNVSFQWDSAGLVNQNGSTTVSAGSVHQVNGNVKRGRPKVKSGVDGRHHVAETMVTINSDVPFSCIKPEEVKLSRPDKKRKVVVGAGFRNGSEDKGSKCASESLLAWALYDEEDGMPRLYCLIREIISVNPFKIHISYLGSKTDSEFGLVNWIDSGFTKSCGNFRAVNSDVVEQVNIFSHVLSKEKAGRGGCIRIYPRSGDIWAVYRNWSREWDRSTPDEVRHKYEMVEVLDDYSEELGVCVAPLIKLAGFKTVYKVNTDKSTIQWIPRREMLRFSHQVPSWLLKGEEASNLPERCWDLDPAATPDELLHAATTEAKAL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0019 578 Pfam Domain of unknown function (DUF3444) 366 547 IPR024593 -
Lan11g0019 578 SUPERFAMILY Chaperone J-domain 59 129 IPR036869 -
Lan11g0019 578 CDD DnaJ 66 119 IPR001623 -
Lan11g0019 578 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lan11g0019 578 PANTHER BNAC03G44070D PROTEIN 1 361 - -
Lan11g0019 578 PANTHER BNAC03G44070D PROTEIN 365 571 - -
Lan11g0019 578 Pfam DnaJ domain 66 127 IPR001623 -
Lan11g0019 578 Gene3D DnaJ domain 55 151 IPR036869 -
Lan11g0019 578 SMART dnaj_3 65 122 IPR001623 -
Lan11g0019 578 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lan11g0019 578 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lan11g0019 578 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lan11g0019 578 PANTHER BNAC03G44070D PROTEIN 1 361 - -
Lan11g0019 578 PANTHER BNAC03G44070D PROTEIN 365 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0019 Lan-Chr11 145529 149158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan11g0019 4 298 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.797 2.15e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0019 - - itr:116029387 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0019 11 145529 149158 Lan9g1515 9 21664612 21667919 LSH