Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0002 ATGGATAACGAGGTGTTAGAATTTGATATTGGGTTGGGAAGAGAAGAATACGATGATGAAGGTGATGTTGATGTTGATGGAGTAGGGGACATTGAATTTGCTGCTGATGGCTGTAGCAGAGGTGGTGGTGGTGGTGGTAGTGAAATATATATCATTCCTCCTGAGACTGGTGATGAGGGCATGATGATAGACCTCTTAGATCTTGAACCTTATGAGGGTATGGAATTCGTGTCTGAGGAAGCTTCCAAGGCCTTCTATAATTCTTATGCACGCCGTATTGGCTTCAGTACTCGTGTCAGCTCATCACGTCGTTCCAGGCGAGACGGAGCCATCATACAGAGACAATTTGTTTGTGCAAAGGAAGGGTTTCGCAACTTGAATGAGAAACGCACCAAGGATAGGGAGATCAAGCGCCCCCGAACTATTACTAGAGTCGGATGCAAAGCATCTCTGTCTGTCAAAATGCAAGATTCTGGCAAGTGGGTTGTGTCTGGGTTTGTTAGAGAACATAATCATGAATTGGTTCCACCAGATCAGGTGCATTGCCTTCGCTCTCACAGGCAAATATCAGGAGCTGCCAAAACCCTCATCGATACTTTACAGGCTGCTGGAATGGGTCCTCGTAGAATTATGTCTGCACTAATTAAAGAGTATGGCGGGATTAGCAAAGTCGGCTTTACAGAGGTTGACTGTAGGAATTACATGAGGAATAATCGTCACAGAAGTTTAGAAGGGGACATCCAACTCGTTCTAGATTATTTGAGACAAATGCATGCTGAAAACCCTAATTTCTTCTATGCAGTGCAAGGTGATGAGGATCAATCCATGAACAATGTCTTCTGGGCTGATCCCAAAGCAAGGATGAACTATACATTTTTTGGTGATACTGTAACTTTTGATACTACTTATCGATCCAATAGGTATCGGTTACCCTTTGCTCCCTTTACTGGTGTAAACCATCACGGACAGCCTGTTCTCTTTGGTTGCGCTTTCCTAATAAATGAATCTGAAGCATCATTTGTGTGGCTTTTCAAGACATGGCTTATGGCCATGTCTGGACGCTCTCCAGTGTCAATAACAACTGATCATGATTCCGTAATTCGGTCAGCCATAATACAAGTATTCCCTGAGGCCCGTCACCGCTTCTGCAAGTGGCACATCTTTAAAAAATGCCAGGAGAAGTTATCTCACATTTTCCTCCAACATCCAAATTTCGAAGCTGAATTTCACAAATGTGTTAACTTGACTGAGTCCATTGAGGAGTTTGAGTCTTGCTGGTCAACACTTGTCAATAGATATGAGCTCAGGGACCATGAATGGCTTCAAGCAATATATTCTGATTGCAGGCAGTGGGTACCTGTATACTTGCGGGATACATTCTTTGCAGAAATGTCTATCACTCAACGAAGTGATAGCATGAACTCATATTTTGATGGTTATGTAAATGCTTCGACCAATTTAAATCAGTTCTTTAAGCTGTATGAGAAAGCACTAGAAAGTCGCAACGAGAAAGAAGTTAGAGCAGATTATGACACAATGAACACTTTACCAGTATTGAGGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTTTACACTAGAAAAATTTTCATGAGGTTCCAGGAAGAGTTAGTTGGGACACTAACATTCATGGCATCCAAGGCTAAGGATGATGGAGAGGTCATTACATATCATGTAGCAAAATTTGGAGAGGACCATAAATCATACCATGTCAAATTCAACGTTTTGCAGATGAAAGCTACATGTAGTTGCCAAATGTTTGAGTTCTCTGGCCTTCTCTGTAGACATGTTTTGGCAGTCTTTAGAGTAACCAATGTGCTTACTCTCCCATCTCATTATATATTGAAACGCTGGACAAGAAATGCCAAGAGCAATGTAATATTACAAGAACATTCTTGTGATGTATATACGTACTATTTAGAATCTCATACAGTCAGATATAATACCCTTCGGCATGAGGCCCTTAAATTTGTTGACGAAGGAGCAAAATCTCCTGAAACTTATGATGTTGCAATCGATGCTTTACAAGAAGCTGCAAAAAGAGTTGCTCATGCGATGCAAAATGAGGGAAGAGTACCCATCAACAATGGGAAAGTTAAGAGTCACTTGCTGAATGATGAAAGGCATGGTAATTACACAAGTGGATGCCAGGAAGAAAATTTGGGACAGCATATGTCTGAGGATGAAATGGACAAGAATATTAGAGAACTTATGAGTGAGCTTGACTGTGCATATCGGAAATGTGAAATTTACCGGTCCAACCTGCTCTCAGTTTTGAAAGCTGTTGAGGATCATAAGTTAGAGTTGTCCGTTAAGGTCGAAAATATCAAGATAAGTATGAAAGATAGCCTCTAA 2379 0.414 MDNEVLEFDIGLGREEYDDEGDVDVDGVGDIEFAADGCSRGGGGGGSEIYIIPPETGDEGMMIDLLDLEPYEGMEFVSEEASKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWVVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRHRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQSMNNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMSGRSPVSITTDHDSVIRSAIIQVFPEARHRFCKWHIFKKCQEKLSHIFLQHPNFEAEFHKCVNLTESIEEFESCWSTLVNRYELRDHEWLQAIYSDCRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTNLNQFFKLYEKALESRNEKEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKAKDDGEVITYHVAKFGEDHKSYHVKFNVLQMKATCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVILQEHSCDVYTYYLESHTVRYNTLRHEALKFVDEGAKSPETYDVAIDALQEAAKRVAHAMQNEGRVPINNGKVKSHLLNDERHGNYTSGCQEENLGQHMSEDEMDKNIRELMSELDCAYRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDSL* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0002 792 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 66 765 - -
Lan11g0002 792 SMART 26again6 588 615 IPR006564 GO:0008270
Lan11g0002 792 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 66 765 IPR031052 GO:0006355
Lan11g0002 792 Pfam MULE transposase domain 297 390 IPR018289 -
Lan11g0002 792 Pfam SWIM zinc finger 565 611 IPR007527 GO:0008270
Lan11g0002 792 Pfam FAR1 DNA-binding domain 85 176 IPR004330 -
Lan11g0002 792 ProSiteProfiles Zinc finger SWIM-type profile. 577 613 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0002 Lan-Chr11 20820 24586 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan11g0002 MULE 1.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0002 - - gmx:100793442 1397.88