Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1107 ATGGAGGAGAAGAACCTTGATGAAAACTCAAGTAGTTTCACATGCAAACAAAACGACAACAACTCCGGCGAAATGCCACGTTCTCCGATGGAGGACCCCGCAGAAACTGATGCCAAACAAAATGATGAAATCGAAAAAACCGTTAACGAGGGAAATCACGCGAAGGAGAAGGAGGAGGTTGATGGTGTAGAAGCTCCACCGGAATCTGAGTCTCCTCTGCCATGCATAGAGAAGGTTTCAGAAGACATTGATGAGTTCCTGGTGAGTCTAGTGGAACAAAAGGAGAAAGAAGCGACGTCGTTTGGAGTACCTGGTTTGGTTGAAAGGTTCTTGGATCTCATGGAAGATAAAATAGCTAAGTATGATGTTGAAGGGAAAGCTAAATGGGGAGAGCTGCCAGAAGAAGACGCTTCGTTTCTTGAATCAATAACTCGGATTTCAAAGCTTATGAAATCACTCACTCTTCAAATGGATTCAACTCCTCCACCACCTTCTTTTGAAGGTGAAGAAATTAAAGGAACGAAGGACTCACTCGTTAATCGCATTGGATTAGTCCAACAACGTATGATGTTGTATTTGGAAGAAGATTTTCGTTACTTATTGGAAGAATCTAGAAACAACCCAACCAAATTGGATCATGGTGGGAACCAGAATCAGAATCAGAATCACGCTTATCACAAAGGGAAGCAAGTTGTATCAGAACAACACGAACTGAATCATGAAAAAATTGAAGAATCGGATCATGATTTCCCTGGTTACTCTAATGACGCCATTCTTAACCTCAACAAGATTGCTGGAGCAATGTTATGCGGCGGTTACCAATCTGAATGTTCTCAAGTGTACATCATTTCAAGGAGGAATGCTTTGGAGGAGAGTTTGCATAAATTGGGATTTGAGAAAATCAGCATTGATGAGATGCAGAAGGTGCAATGGGAGACTTTAGCGAGGGACATGGTACCGGCGTGGATCAACACGTTCAAACAATGTGCTTCAATGTACTTCTCCAACGAGAGGAAGTTGGCGGAGGCTGTATTCGTGGAGCACCCGAATGTGGCGGCGGGGCTCTTCAGCAACCTCTCTCGCGGCGTTGTGATCCAACTTCTGAATTTCGCAGAGGGTGCAGCCATGACGAAGCGCGCTGGAGAGAAGTTGTTCAAGCTCCTCGACATGTATGAGACCCTCCGGGATGTTATCTCGAAGCTGGATGAGTTATTCCCGGAGGAGTGTGTCAAGGAGCTGAAGACAGAGATGACACTCGCCAAGTGTAGACTTGGAGAGGCAACTATCTCTATCTTCTGCGACCTCGAAATATCAATCAAATCAGAAACAGTCAAAACACCTGTACCCGGTGGAGCAGTTCACCCCCTCACACGCTACATCATGAACTATCTCAACATAGCAGGAGATTATAGAGAAACATTGGAGCAAGTATTCAAGGAACATTCAAAATTCGACCATGTCGATTCCACAAGCAGTCCACATCATGAAAATGATGACAACATTAGTGGTGGTGGTGGTGGCAGTAACAATGATGATAACAAGGATGTGTCACCATTTGCAGCACAAGTAACAAGGGTGATGGAACTATTGGACACAAGCCTTGAAGGGAAAGCGAAATTGTATAGGGACATTGCATTAAGCAACTTCTTTATGATGAACAATGGAAGATACATTCTGCAAAAGATTAAGGGATCCTCAGAGATGGCTCGATTGATGGGTGACACATGGTGTAGGAAGAGATCCTCAGAGCTTAGGACATACCATAAGAACTACCAGAGGGAGACATGGAATAGAGTGGTTGCGTGTTTGACCCATGAAGGGTTAAATGTGAATGGTAAGGTGCAGAAACTGGTGCTGAAGGAAAGGTTCAAGAGCTTCAATGCTTTATTTGATGAGATACATAGGACACAAAGCACATGGGTAGTTAAGGATGAGCAGCTTCAATCAGAGCTAAGAGTTTCAATATGTGCAGTGGTGATCCCAGCTTATAGGTCATTCCTTGGGAGATTTGCACAGTACATAGACCCAGGAAGACAAACAGAGAAGTATGTTAAGTATCAGGCTGAAGATATAGAAACTTATATTGATGATTTGTTTGATGGGAAGCCTCATCAGTCCATTGGTAAAAGAAAAACATAG 2139 0.4357 MEEKNLDENSSSFTCKQNDNNSGEMPRSPMEDPAETDAKQNDEIEKTVNEGNHAKEKEEVDGVEAPPESESPLPCIEKVSEDIDEFLVSLVEQKEKEATSFGVPGLVERFLDLMEDKIAKYDVEGKAKWGELPEEDASFLESITRISKLMKSLTLQMDSTPPPPSFEGEEIKGTKDSLVNRIGLVQQRMMLYLEEDFRYLLEESRNNPTKLDHGGNQNQNQNHAYHKGKQVVSEQHELNHEKIEESDHDFPGYSNDAILNLNKIAGAMLCGGYQSECSQVYIISRRNALEESLHKLGFEKISIDEMQKVQWETLARDMVPAWINTFKQCASMYFSNERKLAEAVFVEHPNVAAGLFSNLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMYETLRDVISKLDELFPEECVKELKTEMTLAKCRLGEATISIFCDLEISIKSETVKTPVPGGAVHPLTRYIMNYLNIAGDYRETLEQVFKEHSKFDHVDSTSSPHHENDDNISGGGGGSNNDDNKDVSPFAAQVTRVMELLDTSLEGKAKLYRDIALSNFFMMNNGRYILQKIKGSSEMARLMGDTWCRKRSSELRTYHKNYQRETWNRVVACLTHEGLNVNGKVQKLVLKERFKSFNALFDEIHRTQSTWVVKDEQLQSELRVSICAVVIPAYRSFLGRFAQYIDPGRQTEKYVKYQAEDIETYIDDLFDGKPHQSIGKRKT* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1107 712 MobiDBLite consensus disorder prediction 10 25 - -
Lan10g1107 712 PANTHER EXOCYST COMPLEX PROTEIN EXO70 65 707 IPR004140 GO:0000145|GO:0006887
Lan10g1107 712 MobiDBLite consensus disorder prediction 1 74 - -
Lan10g1107 712 Gene3D Exocyst complex component Exo70 120 708 - -
Lan10g1107 712 SUPERFAMILY Cullin repeat-like 133 700 IPR016159 -
Lan10g1107 712 MobiDBLite consensus disorder prediction 30 64 - -
Lan10g1107 712 MobiDBLite consensus disorder prediction 496 516 - -
Lan10g1107 712 Pfam Exo70 exocyst complex subunit 321 697 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan10g1107 712 MobiDBLite consensus disorder prediction 485 516 - -
Lan10g1107 712 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 65 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1107 Lan-Chr10 16291424 16294164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1107 29 712 EXO70 exocyst subunit family AT5G13990 48.660 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1107 K07195 - gmx:100820172 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g1107 10 16291424 16294164 Lan8g1044 8 12734686 12738219 PCT
Lan10g1107 10 16291424 16294164 Lan20g1511 20 21961909 21965959 PCT
Lan8g1044 8 12734686 12738219 Lan10g1107 10 16291424 16294164 PCT
Lan20g1511 20 21961909 21965959 Lan10g1107 10 16291424 16294164 PCT