Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1105 ATGGAAAACTCATATGAAAATGGATTTCAACTTAGCTTAAAATTAAGCGAACCAATCCTAGTTACTCCTGCAGAGGAAACTAAGAAAGGAAAATATTTCCTTTCTAACCTTGATCAAAACATTGCAGTGAATATCAGAACTGTTTATTGCTTCAAAGATGAAGATAAAGGAAATGAAGAAGCTGGAGAAGTGATGAAGAATGCGTTGAGGAAGGTTCTTGTCCATTATTATCCACTTGCTGGAAGATTGAACATAAGCTCAGAGGGTAAACTCATAGTTGATTGCACTGGTGAGGGTGCCATGTTTGTGGAGGCTGAAGCAAATTGTTCAATGGAGGATATTGGTGATATCACAAAACCAGACCCTGGGACTCTTGGGAAGCTTGTTTATCACATTCCTCATGCTAAGAACATTCTTCAGATGCCTCCACTGATTGCTCAGGTGACCAAGTTTAAATGTGGAGGATTTGCTCTTGGGCTTTGCATGAATCACTGCATGTTTGATGGCATTGGAGCAATGGAGTTTGTGAACTCTTGGGGAGAATTAGCAAGGGGATTACCACTCTCAACCCCTCCATATCTTGACAGAACCATACTCAAAGCACGAATTCCACCTAAGATAGAGTCTTTGCACCAAGAATTTGCAGACATTGAAGACAAGTCCAACACTAATGGTTTATATGAAGATAAAATGGTTTATAGGTCCTTCTTTTTTGACCCTGAGAAGCTAAAGCAACTAAAAGAGAAAGCAATGGAAGATGGGTCTCTTGAAACTTGTACAACATTTGAAGTTCTCTCAGCTTTTGTGTGGATAGCAAGAACCAAAGCACTGAAAATGTTACCTGATCAAGAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCTAAGTTTAACCCTAATCTACCAAAAGGGTACTTTGGGAATGGCATTGTACTAACAAATTCTATATGTAAAGCAGGTGAATTGACAAGTAAGCCCTTCTCATTTTGTGTGAGGCTCATGCAAAATGCAATAAAGATGGTCACTGATAACTACATGAGATCAGCTATAGATTATTTTGAAGTCACAAGAGCTAGGCCTTCTTTAGCTTGTACCCTTTTGATCACAACTTGGTCTAGGTTATCTTTTCATACCACTGATTTTGGATGGGGAGAACCTGTTCTTTCAGGTCCAGTTTCATTGCCTGAGAAGGAAGTCATTTTGTTCCTTTCTCATGGTAAAGAGAGGAGAAGCATCAATGTTCTTCTTGGTTTGCCAGAACCTGTCATGAAGGTTTTCCAAGACTTGATGCAGATATAG 1299 0.3934 MENSYENGFQLSLKLSEPILVTPAEETKKGKYFLSNLDQNIAVNIRTVYCFKDEDKGNEEAGEVMKNALRKVLVHYYPLAGRLNISSEGKLIVDCTGEGAMFVEAEANCSMEDIGDITKPDPGTLGKLVYHIPHAKNILQMPPLIAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGELARGLPLSTPPYLDRTILKARIPPKIESLHQEFADIEDKSNTNGLYEDKMVYRSFFFDPEKLKQLKEKAMEDGSLETCTTFEVLSAFVWIARTKALKMLPDQETKLLFAVDGRAKFNPNLPKGYFGNGIVLTNSICKAGELTSKPFSFCVRLMQNAIKMVTDNYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGKERRSINVLLGLPEPVMKVFQDLMQI* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1105 432 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 12 431 - -
Lan10g1105 432 Gene3D - 13 213 IPR023213 -
Lan10g1105 432 Gene3D - 214 431 IPR023213 -
Lan10g1105 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 431 - -
Lan10g1105 432 Pfam Transferase family 20 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1105 Lan-Chr10 16253438 16256553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1105 11 430 Monolignol Biosynthesis Gene Families AT5G48930 34.713 6.63e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1105 K15400 - gmx:100804504 766.148