Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1100 ATGGATCCCAAGGGCTCAAAGCAGCCACAACAAGAACAAGAACAAGAACAAGGTAAGAACAACAACATGGGAGAGAATAAAACATCAGAGGTAAAGGATTTTCAGATTGTGATTGCTGAAAAAGAAGATAGTAGTAAGAAGCAATTAGCACCAAAGAGGGCTTCAAACAAAGACAGACACACAAAAGTTGAAGGAAGAGGAAGAAGGATAAGGATGCCAGCTTTATGTGCAGCTAGGATCTTTCAGTTGACCAGAGAATTGGGTCATAAATCTGATGGTGAAACAATCCAATGGCTTCTTCAACAAGCTGAACCATCTATTATAGCAGCTACTGGAACTGGAACAATACCAGCATCAGCTTTATCTGCTGCTGCTAACTCACTTTCACAACAAGGAACTTCTCTATCTTCTGGGTTGCACCAAAAACTTGATGAGTTAGGGTCCAATATTGGGTCAGGGAGTAGGTCAAGTTGGTCAATGGTTGGAGGAAATTTAGGAAGACCTCATGTGGCTACAACAGGTTTATGGCCACCTCATGTTAGTGGATTTGGATTCCAATCATCATCTGGTCCATCTACACCTAGTTTAGGGGCTGAAGGTTCAAATTATCTTCAAAAAATTGGGTTCCCTGGGTTTGACTTACCTAATCCCAACATGGGTCAGATGAGTTTTACCTCAATTTTGGGTGGTGGGTCTAACCAGATGCCTGGTTTGGAGCTTGGTTTGTCTCAAGATGGTCATATAGGGGTCTTGAATCCACAGACTTTGAGCCAGATTTATCAGCAGATGGGTCAACAAGCTAGAGTTCAGCAGCAGCAGCAGCAACATCAACATCAACATCTGCATCAGCACCAGCAGCAGCATCCTACTAAGGATGATTCTCAAGGTTCAGAACAGTAG 900 0.4289 MDPKGSKQPQQEQEQEQGKNNNMGENKTSEVKDFQIVIAEKEDSSKKQLAPKRASNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALSAAANSLSQQGTSLSSGLHQKLDELGSNIGSGSRSSWSMVGGNLGRPHVATTGLWPPHVSGFGFQSSSGPSTPSLGAEGSNYLQKIGFPGFDLPNPNMGQMSFTSILGGGSNQMPGLELGLSQDGHIGVLNPQTLSQIYQQMGQQARVQQQQQQHQHQHLHQHQQQHPTKDDSQGSEQ* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1100 299 MobiDBLite consensus disorder prediction 267 299 - -
Lan10g1100 299 ProSiteProfiles TCP domain profile. 56 110 IPR017887 -
Lan10g1100 299 MobiDBLite consensus disorder prediction 34 66 - -
Lan10g1100 299 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 25 299 - -
Lan10g1100 299 MobiDBLite consensus disorder prediction 285 299 - -
Lan10g1100 299 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 299 IPR005333 GO:0003700
Lan10g1100 299 MobiDBLite consensus disorder prediction 10 29 - -
Lan10g1100 299 Pfam TCP family transcription factor 55 142 IPR017887 -
Lan10g1100 299 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1100 Lan-Chr10 16206237 16207997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1100 25 297 TCP Transcription Factor Family AT3G27010 59.717 1.71e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan10g1100 TCP 7.5e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1100 - - vvi:100253170 391.349