Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1075 ATGAGAACTTTGGTCTTATTCCTTTGGCTATTTGTCCCTTCATTAGGCCAAGACCTTCTAAGTTGTGAAACAACATCAGAAGAAGTTTTTGGCTACAATTGCAACAATGGAAATAGTTCACAAAACCAATGTGAAACATTTGCACTCATTTTCACTAATTCATACTATTCATCATTGTCTAATTTGACCACAAACTTGGGACTTAACCGGTTTGTAATAGCAGAAGCTAATGGTTTCTCTGCTGAAACTGAGTTTCTTTCTCAGGGTCAGCCTCTTCTGATACCAATTGATTGCAAGTGCAAAGGTGATATTTTTCGCGCCGAGTTATCGAAGATTAGCATCAAAGGGGAGAGCTTTTATGGTATTGCAAAATCACTTGAGGGCTTGACAACATGCAAGGCTATAAGGGAAAACAACCCTAGTGTTTCACCTTGGAATCTTGTTGATAAAATCAAATTAGTTATCCCATTGAGATGTGCATGCCCATTTTCATCACAAGTTATTCCACAACCAAGATTTATGCTTTCTTATCCAGTGAGTGAAGGTGATACAATTTCAAATTTGGCTTCAAAGTTCAATATTACTAAAGAAGCTATTGTTTCTGCTAATAACATATCATCATCTGAAGGTTTTAGACCTGAAAGCCTTATACCCTTTACATCAATTCTGATTCCACTAAATGGTAACCCTATACTTGGTCCTTTGGCTAAACCAAAGGAACCAAATTCTGGTTTTAGTGCAACCAGAATCCCAGTAATTGGTCCACACAAGAAGTCGAAAATGTCGAAAACTGATTTGTATATTGGGCTAGGTGGTGTTGCACTTGGTGTTTTCATTGCTTCTGCAGTAGTTTTCTTTGTTATCAGGTTGAAGCATAAGAGGTTAGAAGAGAGTTCAATCAAAGAAGCAGATTTGGAGCTGGAACATCTGAATCTTAGTGTAAGAACCACCACTACAAATGACAAAAAAGTTTCATTTGAGGGGTCTCAGGATACTCTTGATGGGAAAATTGTTGATTCGACTACGCCGCGTAAAATGTTGTTGGAGATATACACAACTGAAGATATGAAAAAGGCAACTGAGGATTTCAATTCAAGTAATCAAATTGAGGGATCGGTATTTCGCGGTCGCCTAATCGGAAAGGACATGGCAATTAAAAGAACAAAGACAGATATTGCATCAAAGATAGATCTTTCCCTTTTCCATGATGCAATTCACCACCATCCCAACATACTAAGGCTTCTTGGAACAAGCTTATCCGAAGGGCCAGAGTCATTTTTGGTTTACGAGTTTGCGAAAAATGGTTCGCTAAAAGATTGGCTTCATGGTGGCTTGGCCATCAAGAATCAATTCATTTCCTCATGCTATTGCTTCCTGACTTGGAGCCAAAGGCTCAAGATATGCCTCGATGTGGCCGCGGCATTGCAATATATGCACGAGGTTATGAATCCAAGCTATGTGCATATGAATGTAAAGAGCAGGAACATCTTTTTAGATGAAGAATTTGGAGCAAAGTTAGGCAATTTCGGGATGGCAGGGTGTGTTGAGAATGAAACTGAGGACCCGAATTTCTATTCTACTAACCCTGCATCTTGGAGTATTGGTTATTTGGCACCAGAATATGTTCACCAAGGTATAATTTCTCCAAGCATTGATATCTTTGCTTATGGTATTGTCTTGTTAGAAGTTTTATCAGCCCAAACACCTATAAGCCGGCCTAATGACAAGGCGGACGGAAGCGTATGGCTTACGGACAAAATCAAGTCCATTTCGATGTCGAAAAATGTTAATGAGCTAAGGGAGTGGATAGACAATGCATTAGGGGAGAATTATTCAGTTGATGCAGTTGTTTCAGTGGCTAATATTGCAAGAGCTTGTGTAGAAGAAGATGCTTCTTTGAGACCAAGTGCAAGGGAAATTGTTGAGAAGCTATCAACATTGGTGGAGGAATTACCAGAAGGGGAACAAAACATGCTAATGAGTGAAAGCTCTAGTAGTCCTTTGGTGAATGTAGTTGGAAAAATTATGTGA 2031 0.3914 MRTLVLFLWLFVPSLGQDLLSCETTSEEVFGYNCNNGNSSQNQCETFALIFTNSYYSSLSNLTTNLGLNRFVIAEANGFSAETEFLSQGQPLLIPIDCKCKGDIFRAELSKISIKGESFYGIAKSLEGLTTCKAIRENNPSVSPWNLVDKIKLVIPLRCACPFSSQVIPQPRFMLSYPVSEGDTISNLASKFNITKEAIVSANNISSSEGFRPESLIPFTSILIPLNGNPILGPLAKPKEPNSGFSATRIPVIGPHKKSKMSKTDLYIGLGGVALGVFIASAVVFFVIRLKHKRLEESSIKEADLELEHLNLSVRTTTTNDKKVSFEGSQDTLDGKIVDSTTPRKMLLEIYTTEDMKKATEDFNSSNQIEGSVFRGRLIGKDMAIKRTKTDIASKIDLSLFHDAIHHHPNILRLLGTSLSEGPESFLVYEFAKNGSLKDWLHGGLAIKNQFISSCYCFLTWSQRLKICLDVAAALQYMHEVMNPSYVHMNVKSRNIFLDEEFGAKLGNFGMAGCVENETEDPNFYSTNPASWSIGYLAPEYVHQGIISPSIDIFAYGIVLLEVLSAQTPISRPNDKADGSVWLTDKIKSISMSKNVNELREWIDNALGENYSVDAVVSVANIARACVEEDASLRPSAREIVEKLSTLVEELPEGEQNMLMSESSSSPLVNVVGKIM* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1075 676 ProSiteProfiles LysM domain profile. 175 224 IPR018392 -
Lan10g1075 676 Pfam Protein tyrosine and serine/threonine kinase 383 644 IPR001245 GO:0004672|GO:0006468
Lan10g1075 676 Gene3D Phosphorylase Kinase; domain 1 337 431 - -
Lan10g1075 676 Pfam LysM domain 177 209 IPR018392 -
Lan10g1075 676 Gene3D LysM domain 174 225 IPR036779 -
Lan10g1075 676 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 671 - -
Lan10g1075 676 PANTHER PROTEIN LYK2 2 671 - -
Lan10g1075 676 CDD LysM 176 213 IPR018392 -
Lan10g1075 676 Gene3D Transferase(Phosphotransferase) domain 1 432 665 - -
Lan10g1075 676 SUPERFAMILY Protein kinase-like (PK-like) 345 649 IPR011009 -
Lan10g1075 676 ProSiteProfiles Protein kinase domain profile. 359 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1075 676 SMART LysM_2 176 225 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1075 Lan-Chr10 15973597 15975897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1075 22 669 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.943 1.01e-153 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lan10g1075 Pkinase 1.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1075 - - gmx:100816082 1027.31