Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1059 ATGACGGTGTTCTCCGCCAAGCAGGTGTTCCCGGTGGACTACGAATCTCACGTCTCACAGCTCCTTCTACAAGCTTCTCACTCCGGCGATCTCACCTCCGTCTTCCACTGCATTTCCGATCCCTCCGTCGACGTTAACTTTTCCGGCGCCGTCACGTTGAAAACTAGGAACACCGATCTCGTCCTCTTCAATGAAACCGCTACACAAGTTTGCGTCCAGTTTCAGGAATTCGTCACTGACGTCACGCCTCTGTTCCTCGCGGTTCATGCCGGAAACGCGAACCTTGTTAGAAAGTTACTGAGTATTGGAGCTGATGTAAACCAAAAGCTCTTCAGAGGCTTTGCAACAACTGTGGCAGTGAGAGAAGGCCACCTTAATATTCTTGAGATCTTACTTAAAGCAGGAGCATCACAGCCAGCATGTGAGGAGGCTCTTTTGGAGGCAAGCTGCCATGGACAAGCAGGGTGTGCAGAACTACTCATGAGCTCTGATTTGATCCGACCTCATATCACAGTACATGCTCTCATGACCGCATGCTGTAGGGGGTTTGTAGATGTGATTCAGACACTCATAAAGTGTGGTGTTGATGCAAATGCGACAGACCGTGTACTTTTACAGTCACTTAAGCCTTCTCTCCACACAAATGTGGATTGTACTCCTCTTGTTGCAGCTGTAATTCATAGGCAGGTCCCTGTTGTTGGTTTGCTACTGCAGAGCAGTGCTAGGATAGACTCTGAAGTGAGGCTCGGAGCCTGGTCGTGGGACATTTCAACTGGTGAAGAGCTTCGTGTGGGTGCGGGGTTGGGAGAACCTTATGGCATCACCTGGTGTGCAGTTGAGTACTTTGAAAGAAGTGGTGCTATACTGCGCTTGCTTTTGCAACATGCATCCTCCAATACTCCTCACTGTGGGAGAACCCTTCTACACCATGCCATCCTCTGTGGCAATGTCGAGGCTGTCAGGACACTCTTAGAATGTGGTGCTGATCCAGAATCCCCAGTCAAAACAACAAGCAAGACCGAGTTCCTTCCTATACACATGGCATCTCGTCTTGGCTTACCATTAATTATTCAATGCCTTATTGATTTTGGTTGTGAGTTGAACTCTATAACAAACTCTGGTGACACTTCTGTGATGATCTGTGCCAAATACAAACAAGAGGAGTGCCTCAAAGTACTAGCAATGGCTGGTGCTGATTTTGGTTTGGTGAATATTGCTGGTCAATCTGCAAGTTCAATCGCAGAGTCAAACAAGTGGTCACTTGGTTTTCAGCAAGCAGTGCTGGACACAATTAGAGAAGGTAAGATACCGAAATCCAGCAATACTTCTGCATTTCTCCCCTTAATGTTCATAGCTCAGGCTGGAGATACCGAAGCATTGAAAACTGTGATTGAATCTGGAGAATTTGATCTTGACTATCAAGATGATAGTGGTTTCTCTGCTGTTATGCTTACTGCTCTAAAGGGTCACGTGGAATCATTTCGATTGCTTGTATATGCTGGAGCCGATGTAAATCTGTACAATAAATCTGGTGAAACAGCAGTAACCCTGTCTGAATTAAACCAAAACTCCGATATGTTTGAAAAGGTCATGCTTGAATTTGCACTTGAAAGGGACAATCGAAACGCAAGTGGCTTCTATGCTTTACATTGTGCAGCTCGGCGCGGCGACTTGGGTGCTGTTAAATTGCTCACTAGCAAAGGTTATGATGTGAATGTCCCTGATGGGGAGGGCTACACTCCGCTCATGTTAGCAGCAAGGGAAGGCCATGGATCCATTTGTGAGCATCTAATTTCATACGGTGCTCATTGCAATGTGAAAAACGCTAGAGGGGAAACTGCACTTTTACTTGCAAGGAAATCAGCAGCAGGAAACAACAACGCAGAAGCTGTTATCCTCGATGAACTTGCTCGTAAATTGGCATTTCGCGGTGCCTGTGTTCAGAAGCACACCAAAGGTGGGAAGGGCAAGCCACACAAGAAACAACTAAGGATGTTGGACCCTTCAGGTGTGCTGTGTTGGGGAAAATCAAGCCGGAGAAATGTGATGTGTTGTGAGGCAGAGTTAGGACCAAGCTCAACATTACGTAGAAATAGGTACAAGAAAGGCGATGCCGATGAACCCGGAATGTTTAGAGTGCTTACTAACAAGAACAAGGAAGTGCATTTTGTATGTGATGGAGGATTAGAAGTTGCTGAGCTTTGGGTGAGAGGTATAAAACTTGTAACCAAAGTGGCTATTTTTGGGAAGCAGAAAATCAATTTGGGTAAGCATTAG 2277 0.4616 MTVFSAKQVFPVDYESHVSQLLLQASHSGDLTSVFHCISDPSVDVNFSGAVTLKTRNTDLVLFNETATQVCVQFQEFVTDVTPLFLAVHAGNANLVRKLLSIGADVNQKLFRGFATTVAVREGHLNILEILLKAGASQPACEEALLEASCHGQAGCAELLMSSDLIRPHITVHALMTACCRGFVDVIQTLIKCGVDANATDRVLLQSLKPSLHTNVDCTPLVAAVIHRQVPVVGLLLQSSARIDSEVRLGAWSWDISTGEELRVGAGLGEPYGITWCAVEYFERSGAILRLLLQHASSNTPHCGRTLLHHAILCGNVEAVRTLLECGADPESPVKTTSKTEFLPIHMASRLGLPLIIQCLIDFGCELNSITNSGDTSVMICAKYKQEECLKVLAMAGADFGLVNIAGQSASSIAESNKWSLGFQQAVLDTIREGKIPKSSNTSAFLPLMFIAQAGDTEALKTVIESGEFDLDYQDDSGFSAVMLTALKGHVESFRLLVYAGADVNLYNKSGETAVTLSELNQNSDMFEKVMLEFALERDNRNASGFYALHCAARRGDLGAVKLLTSKGYDVNVPDGEGYTPLMLAAREGHGSICEHLISYGAHCNVKNARGETALLLARKSAAGNNNAEAVILDELARKLAFRGACVQKHTKGGKGKPHKKQLRMLDPSGVLCWGKSSRRNVMCCEAELGPSSTLRRNRYKKGDADEPGMFRVLTNKNKEVHFVCDGGLEVAELWVRGIKLVTKVAIFGKQKINLGKH* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1059 758 ProSiteProfiles Ankyrin repeat region circular profile. 577 608 - -
Lan10g1059 758 SMART ANK_2a 577 606 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 216 245 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 112 140 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 443 473 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 170 199 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 373 402 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 544 573 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 79 108 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 303 332 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 477 506 IPR002110 GO:0005515
Lan10g1059 758 SMART ANK_2a 340 369 IPR002110 GO:0005515
Lan10g1059 758 PANTHER ANKYRIN REPEAT-CONTAINING 5 750 - -
Lan10g1059 758 ProSiteProfiles Ankyrin repeat region circular profile. 303 329 - -
Lan10g1059 758 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Lan10g1059 758 ProSiteProfiles Ankyrin repeat profile. 79 111 IPR002110 GO:0005515
Lan10g1059 758 ProSiteProfiles Ankyrin repeat profile. 477 509 IPR002110 GO:0005515
Lan10g1059 758 Gene3D - 336 422 IPR036770 -
Lan10g1059 758 Gene3D - 531 635 IPR036770 -
Lan10g1059 758 SUPERFAMILY Ankyrin repeat 294 619 IPR036770 -
Lan10g1059 758 ProSiteProfiles Ankyrin repeat region circular profile. 477 509 - -
Lan10g1059 758 Gene3D - 7 164 IPR036770 -
Lan10g1059 758 PANTHER ANKYRIN DOMAIN PROTEIN 5 750 - -
Lan10g1059 758 Pfam Ankyrin repeats (3 copies) 281 331 IPR002110 GO:0005515
Lan10g1059 758 Pfam Ankyrin repeats (3 copies) 84 163 IPR002110 GO:0005515
Lan10g1059 758 Pfam Ankyrin repeats (3 copies) 534 608 IPR002110 GO:0005515
Lan10g1059 758 SUPERFAMILY Ankyrin repeat 22 244 IPR036770 -
Lan10g1059 758 Gene3D - 273 335 IPR036770 -
Lan10g1059 758 Gene3D - 423 530 IPR036770 -
Lan10g1059 758 ProSiteProfiles Ankyrin repeat region circular profile. 79 107 - -
Lan10g1059 758 ProSiteProfiles Ankyrin repeat region circular profile. 544 575 - -
Lan10g1059 758 ProSiteProfiles Ankyrin repeat profile. 544 576 IPR002110 GO:0005515
Lan10g1059 758 ProSiteProfiles Ankyrin repeat profile. 303 335 IPR002110 GO:0005515
Lan10g1059 758 Gene3D - 165 251 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1059 Lan-Chr10 15827645 15832778 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1059 446 618 Ion Channels AT2G25600 29.480 8.35e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1059 - - gmx:100809132 1220.68