Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1057 ATGTTCGTCGGTGGTTCCTTAACTTCAAAGAGGAGAAAAGTCACCAATTTTTATTCAATGGATTCTCAATCTTCTAAGGCCAAGCTTGCAGATTTGAAAGAAAGATTTGGACGAGAGATCCATGTTTTTGAAACATCAGTACTTTCCCCATCTTCAAATGCTGCTTCATCTAATGGAGAGGAGACCGATGACTTCTATGAGTTCACTTCTGAAGATTATTACCGAATTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAACTACGAGAAGCAGATGCGAAGTCTCGCAGGTCAAGAATAACAAAAGCTGTCATCAGAGTTCGCTTTCCCGATAATCACACATTGGAGGCTACCTTTCACCCATCAGAAACAATCCAGAGTTTAATTGATCTCCTCACAAAAGTGATTGCACAGCCAGAGCAGCCATATTATATATATACTACTCCGCCGAAGAAGGTCGTCAACGACTTGTCTCAGGATTTTTATACTGCTGGCTTTTGTCCTGGTGCAATTGTGTACTTTTCATACAATGTTCCAAAAGGTGATAGCACTGTGGTTGACCATATCGGCCCTTACCTACGCGATGAGATCTTATCTTTGAAGGGATTGGATGCCTCTAATGATCAAGGCCAGCAATCCGAGCCGGAGCAGCCTGCGCTAGAGCCAGCCGAGCCAACCCAGCGCCCTCCTATCGAAGAACGCAAACCTGCTGAGAAAAAACTTGTTAAACCAAAGTGGCTAAAAATGTGA 759 0.4282 MFVGGSLTSKRRKVTNFYSMDSQSSKAKLADLKERFGREIHVFETSVLSPSSNAASSNGEETDDFYEFTSEDYYRILATKKEDKFLKTRKLREADAKSRRSRITKAVIRVRFPDNHTLEATFHPSETIQSLIDLLTKVIAQPEQPYYIYTTPPKKVVNDLSQDFYTAGFCPGAIVYFSYNVPKGDSTVVDHIGPYLRDEILSLKGLDASNDQGQQSEPEQPALEPAEPTQRPPIEERKPAEKKLVKPKWLKM* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1057 252 SUPERFAMILY Ubiquitin-like 81 177 IPR029071 -
Lan10g1057 252 CDD UBX2_UBXN9 106 179 - -
Lan10g1057 252 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1-RELATED 8 252 - -
Lan10g1057 252 Gene3D - 95 178 - -
Lan10g1057 252 ProSiteProfiles UBX domain profile. 101 177 IPR001012 GO:0005515
Lan10g1057 252 Pfam UBX domain 104 172 IPR001012 GO:0005515
Lan10g1057 252 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 8 252 IPR044232 GO:0032984|GO:0051117
Lan10g1057 252 MobiDBLite consensus disorder prediction 207 252 - -
Lan10g1057 252 MobiDBLite consensus disorder prediction 230 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1057 Lan-Chr10 15799670 15804556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1057 34 134 C2H2 Transcription Factor Family AT2G01650 35.238 5.97e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1057 K15627 - gmx:100818386 381.333