Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1047 ATGAAGAGAACCAGAAAACAAAGCAAAGATTTTTGTTCTTCTTCTTCTTCATCTTCATCTCTTAAACCACTTGGTAGAAAAAACCGAACAAAAACAAGAAAACCAAAGTTCCTTAGTCTTCGTCTTCAACTTTCTCAACCCAACAAAACAACAACAATGATCCAACAACAACAACAAGAACATGAACAAGAACAAGAACAAGAACAACCACAGTTGAATCTTTTTCCTCTACACCCAGAAACAACAGTGGTTGATGAAAAGCTAGACATGCATGAAGAAACCAACGACGTAGCATTATTCTTCACTTCTGATTGCAGTGCAACCCTTAATGGGTTACTCGAAGATGAATCAACTATAACAAAGAACACAACTTCGTCGGAGGAAGAAGAAGGGTCTTTGTCAGCGTTCGACGGTGGCGGTGGCGGTGGTTGTGGTGGTGGTGGAGAGAGTGGGAGTTGGTTGGTGAAGAAGGCGATGAGGAGGTGTAGTAAAGAAGATGATGGGTGTGAAGAAAGGTGGGTTTGTTACTCGGAGGTGACTAGCGCCACCGTGAGCGCCGCCGTTAAGAATAATGAAGCGGTGGTGGGTGTTGTTAATAAGGAGGATTTGTTGTATGGAACGACGTCGTTTGGGGTATTGTCATTGAAGTTGGATCATGAAGGGATAATGAATGCATGGTCTGATAAAGGGTCACTTTATGTTGAAGGAGAGGGCCCACAAACTGTACCTAATTTTCATCATCTTCATAATCCCAATGTTCCATGGGATGGTTGGGGCAGTGATGCTGGGAACACATGGACTGTTCCAGAAAGTTGTGGGGCTAACAAGATGAAGGAGAAAGAAGAAATGGGTTGGAAACTTGGGCAGAGAGAGGCAAGTGTGCTAAGATACAAAGAGAAGAGGCAAAGCCGGCTTTTTTCGAAGAGGATCCGCTACGAAGTTCGCAAGCTCAATGCCGAGAAGAGGCCTAGGATGAAGGGAAGATTCGTGAAGAGGGAATGA 1002 0.4411 MKRTRKQSKDFCSSSSSSSSLKPLGRKNRTKTRKPKFLSLRLQLSQPNKTTTMIQQQQQEHEQEQEQEQPQLNLFPLHPETTVVDEKLDMHEETNDVALFFTSDCSATLNGLLEDESTITKNTTSSEEEEGSLSAFDGGGGGGCGGGGESGSWLVKKAMRRCSKEDDGCEERWVCYSEVTSATVSAAVKNNEAVVGVVNKEDLLYGTTSFGVLSLKLDHEGIMNAWSDKGSLYVEGEGPQTVPNFHHLHNPNVPWDGWGSDAGNTWTVPESCGANKMKEKEEMGWKLGQREASVLRYKEKRQSRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1047 333 MobiDBLite consensus disorder prediction 10 25 - -
Lan10g1047 333 PANTHER CCT MOTIF FAMILY PROTEIN 18 333 - -
Lan10g1047 333 MobiDBLite consensus disorder prediction 1 73 - -
Lan10g1047 333 MobiDBLite consensus disorder prediction 118 143 - -
Lan10g1047 333 MobiDBLite consensus disorder prediction 39 60 - -
Lan10g1047 333 ProSiteProfiles CCT domain profile. 290 332 IPR010402 GO:0005515
Lan10g1047 333 Pfam CCT motif 290 332 IPR010402 GO:0005515
Lan10g1047 333 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 18 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1047 Lan-Chr10 15739537 15744046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1047 213 332 C2C2-CO-like Transcription Factor Family AT1G73870 45.000 7.33e-22 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan10g1047 CCT 4.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1047 - - adu:107494886 317.005