Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1041 ATGGCTAGAAGCTGGATCATTGACATAGGAGGATTTGCAAAGAAAGTGAAAAGCACTACTCTGTCATCAGCTGAACAAATCAAAGACTGTGGAGCATATCGCGAATGCCCGAACTGTCATTATCGTATTGATAACAGTGATGTTTCTACTGAGTGGCCTGGTTTTCCTCTTGGTGTAAAATTTGATCCTTCTGATGTAGAGCTCATAGAACATTTAGCAGCAAAATGTGGCATCGGTAACACCGAGCCGCACATGTTTATTAACGAGTACATCCGAACCCTTGAAGAAGACCAAGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTTCTAAGAAAGATGGGAGAACTGTGCATTTCTTTCACAGAACTACCAATGCATACTCTACTGGTCAGCGAAAGCGTCGAAAAATTCTTCATGAACACGGTTTGACCGAGGAGCACGTGCGCTGGCATAAGACTGGTAAAACTAAAGCTGTAGTAGAGAATGGAGTACACAAGGGTTTCAAGAAGATAATGGTTCTTTATACAAGGCCTGAGAAAGGGTCCAAGCCCTATAAATCCAATTGGGTCATGCACCAGTACCATCTAGGGACCGAAGAAGACGAGAAGGATGGTGAATATGTGGTGTCGAAAATATTTTACCAACAGCAAAAGCATACTGATAAAATCGACGAGAATCCAATGGCTGTAGATTCTATTGCGCCATCGCGAACAAGTCCAATGACTCCAAAGCCAAATCCCCCCCATCCACCTCGAAAAGGAAAGTGTATTGACTGTGATGACCATATTGATGAAGCGCAGGATTCCAAGACTATCCATGTAGAATCTTATGCCCCGCTATCCGATGTTCCGGCTCAGGACTATGTAGGTGAGCCTGCATGGTTGGCTGGTGAGTCACAGGCTGTGGAAAATGATGAATTTGATGGCTTGGATGATATATTATTATGCAAGGAAATCTTAGATTCTTCTGCTCTATTAAATGATTCCGGATTCAACTCCGCCACTCTCAATGGCTTTGCCACCAATGCTAATGAAATGAATGGAAATGGTGAAGTATCTTATGGAATTTCTGTCCTGGATACCCTGGATTTGGATACTCCTCCAGATTTTGATCTTTCTAATTTGGCCTTTTGTTCTGAAGACAGTATCCTTGACTGGATGGACAGATTATGA 1176 0.4269 MARSWIIDIGGFAKKVKSTTLSSAEQIKDCGAYRECPNCHYRIDNSDVSTEWPGFPLGVKFDPSDVELIEHLAAKCGIGNTEPHMFINEYIRTLEEDQGICYTHPENLPGSKKDGRTVHFFHRTTNAYSTGQRKRRKILHEHGLTEEHVRWHKTGKTKAVVENGVHKGFKKIMVLYTRPEKGSKPYKSNWVMHQYHLGTEEDEKDGEYVVSKIFYQQQKHTDKIDENPMAVDSIAPSRTSPMTPKPNPPHPPRKGKCIDCDDHIDEAQDSKTIHVESYAPLSDVPAQDYVGEPAWLAGESQAVENDEFDGLDDILLCKEILDSSALLNDSGFNSATLNGFATNANEMNGNGEVSYGISVLDTLDLDTPPDFDLSNLAFCSEDSILDWMDRL* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1041 391 Pfam No apical meristem (NAM) protein 56 197 IPR003441 GO:0003677|GO:0006355
Lan10g1041 391 Gene3D NAC domain 64 222 IPR036093 GO:0003677|GO:0006355
Lan10g1041 391 ProSiteProfiles NAC domain profile. 55 216 IPR003441 GO:0003677|GO:0006355
Lan10g1041 391 SUPERFAMILY NAC domain 40 216 IPR036093 GO:0003677|GO:0006355
Lan10g1041 391 MobiDBLite consensus disorder prediction 224 257 - -
Lan10g1041 391 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 1 389 - -
Lan10g1041 391 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 389 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1041 Lan-Chr10 15694351 15697962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1041 33 218 NAC Transcription Factor Family AT4G28500 52.660 4.20e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan10g1041 NAM 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1041 - - gmx:100794879 589.341