Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1037 ATGGATTTCACCGCCAATTCTCTCTTCCGTATTGACCTCAATCAGATCCCTTCGCCCGATCCCACCGCCGCCGCCACCACCACCACTCGCCTCTGCGCCGTGTGCGGCACCACTCAAGTCCACTCACTCGTTGGTTATCAGTGGCGTTGTCGTGAATGTGTGGATGATAGAGTTAACACTGAGTTCTCTCATACCCATGATTTCAGAAAGCAAACTGTGCCCGATAATTCTTTTGGTGCCAATCCATTTGGTGCCTCGATTGCATATTCAAACTTGCACAACGTGAGTGCTTTTGAGGATCCAATTAATCACACCCAATCATTGATTAAAAGCTTTGAGAAGAGTCTTAGAGATTTTATATCTGAATGGCGTGATGAGCTGAAGGACGGTTGGTATGTGGAACTTAGGCAATCAGTGAGCAGTTCTGAAGTGTATGCAGTTTACTGTGCACCAGATGGAAAAACATTTTATTCTTTGTATGAAGTAGCTTGTTATCTGGGGAAAATGTCTGGTCACAATTCTGTGGAATCCGAAATAAGAAATGAGGAGCCGGGTGGGCCTCAAACATCCAGAAAAAGAAAATCCCCGAACTCTCCAGTAGCCAATGGTTTTTCAGAAAAGGGTGGAACCTTGATCAATAGTTATTGCAAGGATCCTCCTTCTGATGGGTTAAGTGTCAAAAGTGATCCTGTTGTTGGTAATATCCCCAAAGCTAATGAAGCTGAAATTATAAGAAAAGAGGATGGTCACTCCAGTCCTGAGAAATCTGCTTTGCGTGCGGAGGTGCCAGATGCGAAGGACTCTTCTGGAAACCTTTTGTGTGGTGATGGCAGTATTCCTGATTGGGCACTGGAACTAGAACCTGTCAGAAAATTACCAACAAATGTTGGAACCCGTATCAGAAAATGTATATATAATGCTTTGGAGAAGAATCCGCCAGAATGGGCTAAGAAAATTCTGTTGCATTCCATCAGTAAGGATGTGTTCAAGGGCAATGCATCTGGACCCACAAAGAAAGCAGTTCTTTCAGTTTTGGCTACTTTAACTGGTGAAGAAATCCAACAAAAGCCGCCCAAAAAAAGAAGGAAATAG 1092 0.4386 MDFTANSLFRIDLNQIPSPDPTAAATTTTRLCAVCGTTQVHSLVGYQWRCRECVDDRVNTEFSHTHDFRKQTVPDNSFGANPFGASIAYSNLHNVSAFEDPINHTQSLIKSFEKSLRDFISEWRDELKDGWYVELRQSVSSSEVYAVYCAPDGKTFYSLYEVACYLGKMSGHNSVESEIRNEEPGGPQTSRKRKSPNSPVANGFSEKGGTLINSYCKDPPSDGLSVKSDPVVGNIPKANEAEIIRKEDGHSSPEKSALRAEVPDAKDSSGNLLCGDGSIPDWALELEPVRKLPTNVGTRIRKCIYNALEKNPPEWAKKILLHSISKDVFKGNASGPTKKAVLSVLATLTGEEIQQKPPKKRRK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1037 363 MobiDBLite consensus disorder prediction 222 272 - -
Lan10g1037 363 Pfam Methyl-CpG binding domain 119 170 IPR001739 GO:0003677
Lan10g1037 363 PANTHER OS02G0192300 PROTEIN 261 363 - -
Lan10g1037 363 PANTHER OS02G0192300 PROTEIN 7 255 - -
Lan10g1037 363 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 7 255 - -
Lan10g1037 363 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 261 363 - -
Lan10g1037 363 Gene3D - 103 207 - -
Lan10g1037 363 MobiDBLite consensus disorder prediction 176 206 - -
Lan10g1037 363 SUPERFAMILY DNA-binding domain 120 174 IPR016177 GO:0003677
Lan10g1037 363 MobiDBLite consensus disorder prediction 190 206 - -
Lan10g1037 363 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 117 184 IPR001739 GO:0003677
Lan10g1037 363 MobiDBLite consensus disorder prediction 240 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1037 Lan-Chr10 15628670 15638639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1037 241 363 C2H2 Transcription Factor Family AT3G01460 57.600 4.23e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1037 K22768 - lang:109358435 595.89