Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1036 ATGGAGTCACTAGTTGATAGAGTTGAGTCTATATCAGAGGTTCCGAATTCAGTTTCCGGGGTAGATCACTATCCTCCTTCCACATCTGGGATGAAGCCTATCATCTACAATCAAAGCAGCTATGTAGTTAATGGCACATCTGACTCTGTGAGCCTCAATAAAACTGTTCAAAGTTGTTTACGGCAGAACATCTCCGCAATGGAAACAAAACTGCGCATCGATCAACCGTTTGAAGATTCCAACAATTGTGAAGTAGAGTCTGATGATGGCATATTAGGTTCATCAAAAGGAGTCGTTGGTCGGGAAAAAAGTCGCTATCAGTCAGAAATTACTTCTAGTCCAAGTCCTCCGAATAGTTTCTGTTCTGCCACTGTCTATTCAGAAGCCAAACAAAGTTTCACCAATACTGTAGCCAGTGAATGTGTTAGTAGTGTCGATAAGTCAGTTGAAAGCGGAGAAGTTACGAATTCATGTTACTTCAATGAGAGCAGGAAGAGCAGCATTTGTCGAGGGAGTACCGGAAGTGATGTAAGTGATGAGAGCAGCACAAGTAGTTTGAGCAATGCTATGTATAAACCTCATAAGGCAAATGATATAAGATGGGAAGCGATTCAAGCCATCCGAGTTCGTGACGGGATGTTGGAAATGAGACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCAGAGTTGAATGGCACAAGGACTTGTTTCGCGATGAAAGTAATGAACAAAACTGAGCTTGCTAGTCGCAAGAAGCTCGTGAGAGCTCAAACCGAGAGAGAGATATTGCAATCTCTAGATCATCCGTTTCTTCCGACATTATATACATACTTTGAGACAGACACATTCTCATGCTTGGTCATGGAGGTTTGCCCTGGTGGGGACTTGCATGCACTCAGGCAAAGACAACCTGGGAAGCATTTTTCTGAACATGCTGCAAGGTTTTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATCATCTACAGAGACCTTAAACCCGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTGTCCGATTTCGATCTCTCTCTAAGGTGTGTTGTTAGTCCAACTCTGGTAAAGTCATCACATGCTTTCATGGAGACAAAGAACTCAGGAGCATACTGCACTCAGCCTGCTTGCATTAAACCGACTTGTGTAATCCAGCCGGACTGCATCCAACCTTCATGTTTCACGCCGCGATTTCTATCAAGCAAATCCAAGAAGAAAGAAAAAAAGTCGAAACCAAAGAATGATATGCATAATCAAGTGATTCCACTCCCTGAGCTTCTTGCCGAGCCTACAAACGCGCGATCGATGTCCTTCGTAGGCACACACGAGTACTTGGCACCTGAGATAATCAAAGGTGAAGGGCACGGCAGTGCTGTAGATTGGTGGACATTTGGTATATTCTTATACGAGCTTTTATTTGGTCGAACGCCTTTCAAAGGTTCAGCGAATAGAGCGACTCTATTTAACGTAGTCGGCCAGCCCTTGAGATTTCCAGAATCTCCTACAGTAAGTTATGCTGCAAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCTCAGCATCGTCTCGCCTATAGACGCGGCGCTACAGAGATTAAACAACATCCATTCTTTCAAAATGTTAACTGGGCGCTTATCCGTTGCGCGAATCCTCCAGAGATTCCGAAACAAGAAATGAAAGCAGCAGCATTCATAGCTGAAAAGGTTCCTGCTGTGAACCCTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1815 0.4347 MESLVDRVESISEVPNSVSGVDHYPPSTSGMKPIIYNQSSYVVNGTSDSVSLNKTVQSCLRQNISAMETKLRIDQPFEDSNNCEVESDDGILGSSKGVVGREKSRYQSEITSSPSPPNSFCSATVYSEAKQSFTNTVASECVSSVDKSVESGEVTNSCYFNESRKSSICRGSTGSDVSDESSTSSLSNAMYKPHKANDIRWEAIQAIRVRDGMLEMRHFRLLKKLGCGDIGSVYLAELNGTRTCFAMKVMNKTELASRKKLVRAQTEREILQSLDHPFLPTLYTYFETDTFSCLVMEVCPGGDLHALRQRQPGKHFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCVVSPTLVKSSHAFMETKNSGAYCTQPACIKPTCVIQPDCIQPSCFTPRFLSSKSKKKEKKSKPKNDMHNQVIPLPELLAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPTVSYAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEIPKQEMKAAAFIAEKVPAVNPSGNYLDIDFF* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1036 604 ProSiteProfiles Protein kinase domain profile. 219 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1036 604 PANTHER FLIPPASE KINASE 1-RELATED 64 604 - -
Lan10g1036 604 SMART serkin_6 219 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1036 604 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 64 604 - -
Lan10g1036 604 Gene3D Phosphorylase Kinase; domain 1 217 302 - -
Lan10g1036 604 Gene3D Transferase(Phosphotransferase) domain 1 303 370 - -
Lan10g1036 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 340 352 IPR008271 GO:0004672|GO:0006468
Lan10g1036 604 Gene3D Transferase(Phosphotransferase) domain 1 452 576 - -
Lan10g1036 604 CDD STKc_phototropin_like 217 576 - -
Lan10g1036 604 Pfam Protein kinase domain 220 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1036 604 Pfam Protein kinase domain 455 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1036 604 SUPERFAMILY Protein kinase-like (PK-like) 195 579 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1036 Lan-Chr10 15622243 15625872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1036 126 604 AGC Kinase Gene Family AT5G47750 71.400 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan10g1036 Pkinase 4.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1036 K08286 - gmx:100802402 944.88