Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1035 ATGTTACTTAATGCAAATTTGCATCATTTTCCACACTCCAAATTACTCCATTCACAAACTCTCAAACCCAACACATTCTTTACCTTCACATACCACAACGCTGCATCAATTAAGGAGAATCATCATATAGGGTTCCACAATATTCTCGGAAAACGTGTAGGCTCTGTCTCATCAATTTTACCCGCCCGGAGCTGGTGGGCGTTGCCGGAGCACCGGGAAGATGATGCCGTAGCGGCGGAGCCTACAGCGGTGGTAGTTGCTGTGAGACAAATGTGGCAGTTGGTTGCTGATCAGCAATTTGTTGCGTTTGTAGCGATTGGCTCCCTTGTCGTGGCTGCTCTTTCAGAGATCTCCATACCGAGTATATTGGCAGCCTCAATATTTTCAGCACAAGGTGGTGAGGCCACAGTGTTCTCTAAGAATGCTCTGTTGTTAGTTCTTTTGTGGTTCACTTCTGGGATATGCAGTGGGCTGCGAAGTGGCTGCTTTGGAATTTTGAATGTGACCTTGGTAAAGCGTCTACGTGAAAATTTATATACCGCCATTCTTTTTCAGGACATATCCTATTTTGATAAAGAAAAGGTTGGTGACTTGACAAGCAGGCTAGCAGCAGACTGTCAAAAATTATCCCATGTTATAGGAAACGATCTTCATTTGATATTACGCAGCACTTTGCAGGGAATAGGAGCAATGGTTAATTTGCTGGCATTATCTTGGCCTCTGGCATTATCTGCCTTGGTCATTTGCTCAATTTTATCTGCGATTTTCCTGGTTTATGGCCAGTATCAACGAAAAGCAGCAAAATTAACCCAAGATTTCGAAGCTTGTGCCAGTGAAGCAGCTCAGGAATCACTTTCTTTGATAAGAACTGTTCGAGCTTATGGAACAGAAAAAAAAGAATTTGATAGATACAACCAGTGGCTGCAGAGATTAGCATTTATCAACAGTCGAGAGAGTGTGGCTAATGGGTTTTGGAGTCTGAGTTTTAGCACCCTTTACCGTTCAACTCAGATATTTGCAGTGCTCTTAGGAGGGATGTCTGTTCTCAGTTGTTCTATAACTACTGAGCAACTTACTAAGTATGTGTTATACTGTGAGTGGTTGATTTATGCCACTTGGAGGGTGACAAACAGTTTATCATCATTAATGCAGTCTATTGGAGCATCTGAAAAGCTTTTCCAACTGATGTCTCTTTTGCCCAGTGACCAATTCTTAGCCAAAGGAGTGAAGTTGCAGAGGCTAATGGGGAAAATTCAATTTGTAGATGTATCATTTCATTATCCATCAAGGATAACGATGCCGGTTCTAGAAAATGTAAACTTCTCTGTAGAACCAAATGAAGTTATTGCCATCGTTGGTCTTAGTGGTAGTGGAAAGAGCACATTACTCAACCTGTTACTTCGTCTCTATGAGCCTAGTAGTGGTCAGATATGTATTGATGGATTTCCTCTTGAAGAATTGGATATCAGGTGGCTGAGACAGAACATCGGATATGTTGCACAGGAACCCCATCTCTTTCACATGGACATCAAGTCAAACATAACATATGGTTGCCCTATGGACAAAAAACAGGAAGATATTGAACGGGCAGCAAAACAGGCCTACGCCCATGACTTTATTTCTTCACTCCCTGATGGTTATGAAACCCTTGTGGATGGCAATGTACTTAGTGGTGGACAAAAGCAACGGATTGCTATCGCTAGGGCCCTTCTTAGGGACCCGGTTATTTTGATACTTGATGAACCAACTAGTGCTCTAGATTCTGAGAGTGAGCATTATATCAAGGAGATCCTGTGTCCATTAAAAGATGAATCCAAATCAAGAACCACCATTATCTTAACACACAGGCTGTCTACTATCGAAGCTGCTGACAGAATCTTTGCTATGAAAGGTGGTCGCATTATTGAGATGGGAAACCATGAAGAGCTTCTGCTCAAGGATGGGCTCTATGCAAAATTAAATAGATTTCAATCAGATATTTTGACCTGA 1989 0.4203 MLLNANLHHFPHSKLLHSQTLKPNTFFTFTYHNAASIKENHHIGFHNILGKRVGSVSSILPARSWWALPEHREDDAVAAEPTAVVVAVRQMWQLVADQQFVAFVAIGSLVVAALSEISIPSILAASIFSAQGGEATVFSKNALLLVLLWFTSGICSGLRSGCFGILNVTLVKRLRENLYTAILFQDISYFDKEKVGDLTSRLAADCQKLSHVIGNDLHLILRSTLQGIGAMVNLLALSWPLALSALVICSILSAIFLVYGQYQRKAAKLTQDFEACASEAAQESLSLIRTVRAYGTEKKEFDRYNQWLQRLAFINSRESVANGFWSLSFSTLYRSTQIFAVLLGGMSVLSCSITTEQLTKYVLYCEWLIYATWRVTNSLSSLMQSIGASEKLFQLMSLLPSDQFLAKGVKLQRLMGKIQFVDVSFHYPSRITMPVLENVNFSVEPNEVIAIVGLSGSGKSTLLNLLLRLYEPSSGQICIDGFPLEELDIRWLRQNIGYVAQEPHLFHMDIKSNITYGCPMDKKQEDIERAAKQAYAHDFISSLPDGYETLVDGNVLSGGQKQRIAIARALLRDPVILILDEPTSALDSESEHYIKEILCPLKDESKSRTTIILTHRLSTIEAADRIFAMKGGRIIEMGNHEELLLKDGLYAKLNRFQSDILT* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1035 662 CDD ABC_6TM_TAP 105 391 - -
Lan10g1035 662 Gene3D ABC transporter type 1, transmembrane domain 83 402 IPR036640 GO:0005524|GO:0016021
Lan10g1035 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 410 657 IPR027417 -
Lan10g1035 662 Pfam ABC transporter 436 584 IPR003439 GO:0005524
Lan10g1035 662 SUPERFAMILY ABC transporter transmembrane region 89 400 IPR036640 GO:0005524|GO:0016021
Lan10g1035 662 Pfam ABC transporter transmembrane region 105 366 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan10g1035 662 SMART AAA_5 445 641 IPR003593 -
Lan10g1035 662 ProSitePatterns ABC transporters family signature. 556 570 IPR017871 GO:0005524
Lan10g1035 662 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 418 656 IPR003439 GO:0005524
Lan10g1035 662 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 103 384 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan10g1035 662 Gene3D - 408 660 IPR027417 -
Lan10g1035 662 PANTHER ABC TRANSPORTER B FAMILY 41 660 - -
Lan10g1035 662 PANTHER ATP-BINDING ABC TRANSPORTER 41 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1035 Lan-Chr10 15606624 15618662 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1035 173 657 Calmodulin-binding Proteins AT2G36910 36.546 2.22e-73 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1035 - - aprc:113857420 963.755