Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan10g1031 | ATGACAGAGATTGCGAGTTCAGTGGTTCACGAGGTTTTGGGACGAAAGATTATTGATGTAGATCAGCCAATTGTTGATTACATCGTCAACGTTCTCGCCGACGAAGATTTCGATTTTGGACTCGACGGTGAAGGTGCCTTTGATGCAATCGGAGAGCTTCTCGTTGCTGCGGATTGTGTTGATGATTTCTCCGAGTGTCGCTCCGTATGTAGCATACTGTCTGAGAAATTCGGAAAGCATGGTTTGGTTAAGGCAAAGCCAACAGTGCGATCGCTTGCTGTGCCGTTTCGAATGAATGAAGGCTTGGATGATGGAGAAGCTCCCAAGAAGAAACCTGAGCCTGTGGATGGACCTTTGCTCTCCGAACGTGACAAGTTAAAGCTCGAAAGGAGAAAGAGAAAGGATGAACGCCAAAGAGAGGCACAATACCAAATGCATTTAGCAGAGATGGAAGCGGCACGGGCTGGGATGCCTGTTGTGTGTGTTAGGCATGATGGTAGTGGTGGAGCAAATATCAAGGACATACATATGGAGAACTTCAATATCTCTGTTGGTGGTCGTGATCTTATTGTTGATGGTTCGGTTACACTTTCATTTGGAAGGCATTATGGCCTTGTTGGAAGAAATGGTACAGGCAAAACAACTTTCCTCAGGCACATGGCTATGCATGCGATCGATGGTATTCCTATGAATTGTCAGATATTGCATGTGGAACAAGAGGTAACTGGTGATAGTACATCTGCCTTGCAATGTGTCCTCAGTGCTGATATTGAGAGAACTCAACTTCTGGAGGAAGAATCCCAATTATTAGCCAAACAGAGGGAATCTGAGGACAAAATCGAGAGGAGTAATGATAATTCGAATGGAGTGGTTGATAAAGATAATATTTCACAAAAGCTTGAGGGAATATACAAGAGGCTTGAGTTGATTGACGCTTATTCTGCAGAGTCACGTGCAGCAACAATACTTGCGGGTCTAAGTTTCACTCCGGAGATGCAGAAGAAAGCAACAAAAACGTTTTCTGGAGGGTGGCGGATGCGAATAGCTCTTGCTCGTGCATTGTTTGTAGAGCCTGATATGTTGCTTCTTGATGAGCCAACGAACCATCTTGATCTACATGCTGTCTTGTGGCTTGAATCGTACTTGGTTAAATGGCCAAAAACTTTTATTGTTGTTTCTCATGCTAGGGAGTTTTTAAACACGGTCGTTACTGATATAGTTCACCTACAAAACCAAAAGCTGACTACATATAAAGGGAATTATGATACTTTTGAGAGAACTCGAGCAGAACAAATGAAAAATCAGCAAAAAGCAGTTGAGGCACATGAACGTTCAAGATCTCATATGCAGTCCTTCATCGACAAGTTCCGTTTTAATGCCAAGAGGGCATCACTTGTTCAATCAAGAATCAAGGCTTTGGACAGAATGGGCCATGTAGACGAAATTGTTAATGACCCTGACTACAAATTTGAGTTCCCAACTCCAGATGATAGACCTGGTGCACCTATAATTAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGCCCCATTCTATTTAGGAATTTGAATTTTGGGATTGATCTTGACAGCCGTATTGCAATGGTTGGACCAAATGGTATTGGAAAATCAACTATACTTAAGTTAATTGCTGGGGAGCTGCAGCCCACTTCTGGGACAGTTTTCCGTTCTGCTAAGGTTCGTATAGCAGTTTTCAGTCAGCATCACGTTGATGGGCTTGACTTATCTTCAAATCCTCTTCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGAACAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTTACGGGAAATCTTGCTCTACAGCCAATGTATACCTTGTCAGGTGGTCAGAAAAGCAGGGTTGCATTTGCAAAGATTACTTTCAAGAAGCCACATATATTATTACTTGATGAGCCATCCAACCATCTGGATTTGGATGCTGTTGAGGCTCTAATTCAAGGTCTTGTGCTGTACCAAGGAGGCATTCTCATGGTGAGTCACGATGAGCATCTTATATCCGGAAGTGTGGAGGAGCTATGGGCTGTTTCCGATGGGAGAGTGACACCATTCCATGGCAGCTTCCATGACTATAAGAGGATACTCCATTCATAG | 2142 | 0.4346 | MTEIASSVVHEVLGRKIIDVDQPIVDYIVNVLADEDFDFGLDGEGAFDAIGELLVAADCVDDFSECRSVCSILSEKFGKHGLVKAKPTVRSLAVPFRMNEGLDDGEAPKKKPEPVDGPLLSERDKLKLERRKRKDERQREAQYQMHLAEMEAARAGMPVVCVRHDGSGGANIKDIHMENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPMNCQILHVEQEVTGDSTSALQCVLSADIERTQLLEEESQLLAKQRESEDKIERSNDNSNGVVDKDNISQKLEGIYKRLELIDAYSAESRAATILAGLSFTPEMQKKATKTFSGGWRMRIALARALFVEPDMLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIVHLQNQKLTTYKGNYDTFERTRAEQMKNQQKAVEAHERSRSHMQSFIDKFRFNAKRASLVQSRIKALDRMGHVDEIVNDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFRNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLYQGGILMVSHDEHLISGSVEELWAVSDGRVTPFHGSFHDYKRILHS* | 714 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan10g1031 | 713 | MobiDBLite | consensus disorder prediction | 102 | 119 | - | - | |
Lan10g1031 | 713 | Pfam | ABC transporter | 194 | 368 | IPR003439 | GO:0005524 | |
Lan10g1031 | 713 | Pfam | ABC transporter | 521 | 651 | IPR003439 | GO:0005524 | |
Lan10g1031 | 713 | Pfam | ABC transporter | 407 | 487 | IPR032781 | - | |
Lan10g1031 | 713 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 485 | 702 | IPR027417 | - | |
Lan10g1031 | 713 | MobiDBLite | consensus disorder prediction | 100 | 119 | - | - | |
Lan10g1031 | 713 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 121 | 711 | - | - | |
Lan10g1031 | 713 | CDD | ABCF_EF-3 | 504 | 696 | - | - | |
Lan10g1031 | 713 | ProSitePatterns | ABC transporters family signature. | 623 | 637 | IPR017871 | GO:0005524 | |
Lan10g1031 | 713 | PANTHER | NON-TRANSPORTER ABC PROTEIN | 121 | 711 | - | - | |
Lan10g1031 | 713 | MobiDBLite | consensus disorder prediction | 273 | 288 | - | - | |
Lan10g1031 | 713 | ProSitePatterns | ABC transporters family signature. | 340 | 354 | IPR017871 | GO:0005524 | |
Lan10g1031 | 713 | SMART | AAA_5 | 199 | 413 | IPR003593 | - | |
Lan10g1031 | 713 | SMART | AAA_5 | 529 | 696 | IPR003593 | - | |
Lan10g1031 | 713 | MobiDBLite | consensus disorder prediction | 273 | 292 | - | - | |
Lan10g1031 | 713 | CDD | ABCF_EF-3 | 175 | 413 | - | - | |
Lan10g1031 | 713 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 175 | 436 | IPR003439 | GO:0005524 | |
Lan10g1031 | 713 | Gene3D | - | 466 | 712 | IPR027417 | - | |
Lan10g1031 | 713 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 504 | 713 | IPR003439 | GO:0005524 | |
Lan10g1031 | 713 | Gene3D | - | 174 | 462 | IPR027417 | - | |
Lan10g1031 | 713 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 175 | 441 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan10g1031 | Lan-Chr10 | 15543561 | 15553372 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan10g1031 | 466 | 665 | Calmodulin-binding Proteins | AT2G36910 | 26.724 | 3.44e-11 | 65.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan10g1031 | K06158 | - | gmx:100790412 | 1260.36 |