Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1031 ATGACAGAGATTGCGAGTTCAGTGGTTCACGAGGTTTTGGGACGAAAGATTATTGATGTAGATCAGCCAATTGTTGATTACATCGTCAACGTTCTCGCCGACGAAGATTTCGATTTTGGACTCGACGGTGAAGGTGCCTTTGATGCAATCGGAGAGCTTCTCGTTGCTGCGGATTGTGTTGATGATTTCTCCGAGTGTCGCTCCGTATGTAGCATACTGTCTGAGAAATTCGGAAAGCATGGTTTGGTTAAGGCAAAGCCAACAGTGCGATCGCTTGCTGTGCCGTTTCGAATGAATGAAGGCTTGGATGATGGAGAAGCTCCCAAGAAGAAACCTGAGCCTGTGGATGGACCTTTGCTCTCCGAACGTGACAAGTTAAAGCTCGAAAGGAGAAAGAGAAAGGATGAACGCCAAAGAGAGGCACAATACCAAATGCATTTAGCAGAGATGGAAGCGGCACGGGCTGGGATGCCTGTTGTGTGTGTTAGGCATGATGGTAGTGGTGGAGCAAATATCAAGGACATACATATGGAGAACTTCAATATCTCTGTTGGTGGTCGTGATCTTATTGTTGATGGTTCGGTTACACTTTCATTTGGAAGGCATTATGGCCTTGTTGGAAGAAATGGTACAGGCAAAACAACTTTCCTCAGGCACATGGCTATGCATGCGATCGATGGTATTCCTATGAATTGTCAGATATTGCATGTGGAACAAGAGGTAACTGGTGATAGTACATCTGCCTTGCAATGTGTCCTCAGTGCTGATATTGAGAGAACTCAACTTCTGGAGGAAGAATCCCAATTATTAGCCAAACAGAGGGAATCTGAGGACAAAATCGAGAGGAGTAATGATAATTCGAATGGAGTGGTTGATAAAGATAATATTTCACAAAAGCTTGAGGGAATATACAAGAGGCTTGAGTTGATTGACGCTTATTCTGCAGAGTCACGTGCAGCAACAATACTTGCGGGTCTAAGTTTCACTCCGGAGATGCAGAAGAAAGCAACAAAAACGTTTTCTGGAGGGTGGCGGATGCGAATAGCTCTTGCTCGTGCATTGTTTGTAGAGCCTGATATGTTGCTTCTTGATGAGCCAACGAACCATCTTGATCTACATGCTGTCTTGTGGCTTGAATCGTACTTGGTTAAATGGCCAAAAACTTTTATTGTTGTTTCTCATGCTAGGGAGTTTTTAAACACGGTCGTTACTGATATAGTTCACCTACAAAACCAAAAGCTGACTACATATAAAGGGAATTATGATACTTTTGAGAGAACTCGAGCAGAACAAATGAAAAATCAGCAAAAAGCAGTTGAGGCACATGAACGTTCAAGATCTCATATGCAGTCCTTCATCGACAAGTTCCGTTTTAATGCCAAGAGGGCATCACTTGTTCAATCAAGAATCAAGGCTTTGGACAGAATGGGCCATGTAGACGAAATTGTTAATGACCCTGACTACAAATTTGAGTTCCCAACTCCAGATGATAGACCTGGTGCACCTATAATTAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGCCCCATTCTATTTAGGAATTTGAATTTTGGGATTGATCTTGACAGCCGTATTGCAATGGTTGGACCAAATGGTATTGGAAAATCAACTATACTTAAGTTAATTGCTGGGGAGCTGCAGCCCACTTCTGGGACAGTTTTCCGTTCTGCTAAGGTTCGTATAGCAGTTTTCAGTCAGCATCACGTTGATGGGCTTGACTTATCTTCAAATCCTCTTCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGAACAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTTACGGGAAATCTTGCTCTACAGCCAATGTATACCTTGTCAGGTGGTCAGAAAAGCAGGGTTGCATTTGCAAAGATTACTTTCAAGAAGCCACATATATTATTACTTGATGAGCCATCCAACCATCTGGATTTGGATGCTGTTGAGGCTCTAATTCAAGGTCTTGTGCTGTACCAAGGAGGCATTCTCATGGTGAGTCACGATGAGCATCTTATATCCGGAAGTGTGGAGGAGCTATGGGCTGTTTCCGATGGGAGAGTGACACCATTCCATGGCAGCTTCCATGACTATAAGAGGATACTCCATTCATAG 2142 0.4346 MTEIASSVVHEVLGRKIIDVDQPIVDYIVNVLADEDFDFGLDGEGAFDAIGELLVAADCVDDFSECRSVCSILSEKFGKHGLVKAKPTVRSLAVPFRMNEGLDDGEAPKKKPEPVDGPLLSERDKLKLERRKRKDERQREAQYQMHLAEMEAARAGMPVVCVRHDGSGGANIKDIHMENFNISVGGRDLIVDGSVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGIPMNCQILHVEQEVTGDSTSALQCVLSADIERTQLLEEESQLLAKQRESEDKIERSNDNSNGVVDKDNISQKLEGIYKRLELIDAYSAESRAATILAGLSFTPEMQKKATKTFSGGWRMRIALARALFVEPDMLLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIVHLQNQKLTTYKGNYDTFERTRAEQMKNQQKAVEAHERSRSHMQSFIDKFRFNAKRASLVQSRIKALDRMGHVDEIVNDPDYKFEFPTPDDRPGAPIISFSDASFGYPGGPILFRNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGELQPTSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPEQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLYQGGILMVSHDEHLISGSVEELWAVSDGRVTPFHGSFHDYKRILHS* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1031 713 MobiDBLite consensus disorder prediction 102 119 - -
Lan10g1031 713 Pfam ABC transporter 194 368 IPR003439 GO:0005524
Lan10g1031 713 Pfam ABC transporter 521 651 IPR003439 GO:0005524
Lan10g1031 713 Pfam ABC transporter 407 487 IPR032781 -
Lan10g1031 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 485 702 IPR027417 -
Lan10g1031 713 MobiDBLite consensus disorder prediction 100 119 - -
Lan10g1031 713 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 121 711 - -
Lan10g1031 713 CDD ABCF_EF-3 504 696 - -
Lan10g1031 713 ProSitePatterns ABC transporters family signature. 623 637 IPR017871 GO:0005524
Lan10g1031 713 PANTHER NON-TRANSPORTER ABC PROTEIN 121 711 - -
Lan10g1031 713 MobiDBLite consensus disorder prediction 273 288 - -
Lan10g1031 713 ProSitePatterns ABC transporters family signature. 340 354 IPR017871 GO:0005524
Lan10g1031 713 SMART AAA_5 199 413 IPR003593 -
Lan10g1031 713 SMART AAA_5 529 696 IPR003593 -
Lan10g1031 713 MobiDBLite consensus disorder prediction 273 292 - -
Lan10g1031 713 CDD ABCF_EF-3 175 413 - -
Lan10g1031 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 175 436 IPR003439 GO:0005524
Lan10g1031 713 Gene3D - 466 712 IPR027417 -
Lan10g1031 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 504 713 IPR003439 GO:0005524
Lan10g1031 713 Gene3D - 174 462 IPR027417 -
Lan10g1031 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1031 Lan-Chr10 15543561 15553372 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1031 466 665 Calmodulin-binding Proteins AT2G36910 26.724 3.44e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1031 K06158 - gmx:100790412 1260.36