Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1025 GAACTTGTTGATATATATTCCTTTGGCATGTGTATGCTGGAAATGATCACCTGTGATTACCCATACAGTGAATGTAAAAATCCGGCCCAAATATATAAAAAAGTTACCTCTGGTATAAAGCCTGCTGCTCTTGCCAAAGTAAATGATCTGGAAATGAAGCGATTTATTGAGAAGTGTCTAGTTCCAGCTTCTATGAGATTGCCTGCATCTGAACTATTGAAAGACCCATTCCTTGCAAATGAAAACACAAAGGGGAGCAATCATGATATACGGCATCTTCCTAATCCCCTCCCAAAATTGGTGAATCCACCAATATCTGAGCCTCATCCCATGGAGATAGACTCGAACTTGAGGCATACTTCATCTGGCTCCTCTGTTAGAAGAGTTGAAGATACTTCTTCAACTTTTGATCTCGTCAGAATGACTGAGAATAATGAATTTAGGTTAAGAGGAGATAAAGATGGTGAAAGTGCAATTTCGCTTATGCTGCGAATTGCCGATACAGATGGTCGAGCAAGGAATATCCATTTTCCATTCTTTATCGATTCTGATACTGCAATTTCAATTGCTGCGGAGATGGTGGAACATCTGGAACTCGCAAGTGAGGATGTAGCTGTCATTGCTGAGCTAATACACAACATGATTGTGAAGCTAGTCCCCAACTGGCAACCCTCATCTCAGGACCTTCAATTTCGATCAGATCATTTATGCAGGTCTCCTGATGTTCAGAATGGAGATATAGGAAGCTGCCATTGGCCTCCACTGTCAAGTGATTTTGATACTAAGGCAGTCGATGGGGATTTTGTTATTTCAAAACATATCGACCGGGAAGATCAGGAGAAGCAAGAATCTCTTATGTCGGATATTTCAGCAGAGTATGGGGTTCAAGTTGCCTCAGATTCTAAAGGTTTAGAGCTCGACTTTTCAGTTCTTGATGAATGCTGGAAAGGATCCGATGTCTTCAGTTGCAATTCAGATTTCATGTTTTGTGGTCAAGATGATGGACACAAGAATAAAGCTAATCAATCAGAGAGCCACTCACCAAGCTCATTGATGAATTCATGTTCCAGTGCATCCGAAATATTTGACATGTCGCGCATATGTTCTCTTACTCTCTCCGACAAAGATCTTTCCAGTGATGATTTGCAGTTGGAGCTTGATGCAATAGATATGCAGTATCAACAGTGCTTTCGTCAGATTGAGAAGATGAGGGAGGAAGCCATAGAAAATGCCAAAAGGAAATGGATAGCAAGGAAGATAATGTCAAAAGGAAATGTATAA 1281 0.4075 ELVDIYSFGMCMLEMITCDYPYSECKNPAQIYKKVTSGIKPAALAKVNDLEMKRFIEKCLVPASMRLPASELLKDPFLANENTKGSNHDIRHLPNPLPKLVNPPISEPHPMEIDSNLRHTSSGSSVRRVEDTSSTFDLVRMTENNEFRLRGDKDGESAISLMLRIADTDGRARNIHFPFFIDSDTAISIAAEMVEHLELASEDVAVIAELIHNMIVKLVPNWQPSSQDLQFRSDHLCRSPDVQNGDIGSCHWPPLSSDFDTKAVDGDFVISKHIDREDQEKQESLMSDISAEYGVQVASDSKGLELDFSVLDECWKGSDVFSCNSDFMFCGQDDGHKNKANQSESHSPSSLMNSCSSASEIFDMSRICSLTLSDKDLSSDDLQLELDAIDMQYQQCFRQIEKMREEAIENAKRKWIARKIMSKGNV* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1025 426 PANTHER WNK KINASE 1 419 - -
Lan10g1025 426 SUPERFAMILY Protein kinase-like (PK-like) 3 106 IPR011009 -
Lan10g1025 426 Gene3D - 157 244 - -
Lan10g1025 426 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 419 - -
Lan10g1025 426 ProSiteProfiles Protein kinase domain profile. 1 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1025 426 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 159 215 IPR024678 GO:0004674|GO:0005524
Lan10g1025 426 Coils Coil 386 406 - -
Lan10g1025 426 Gene3D Transferase(Phosphotransferase) domain 1 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1025 Lan-Chr10 15463315 15464989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1025 3 419 MAP Kinase Kinase Kinase AT5G41990 38.663 1.68e-81 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan10g1025 OSR1_C 1e-05 CL0487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1025 K08867 - gmx:100783717 500.36