Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1010 ATGAATCATGACCGTGACAGCGCCGCCGATATTCCTCCACCCGCCGCCGTCGCCGCCGACGATGAAGGAACTACGACTCCGATTCCTGAAAAGGTAACCGTTGGTGGTTCTCCGTTATACAGAATTGGGAGAAAACTTGGGAAAGGAGGGTTTGGACAGGTTTATGTCGGTCACCGCGTCGGAGTTGCTAAGAATTCTACTGATCGGACCGGTCCTGGAGCTGTAGAGGTAGCTTTGAAGTTTGAGCATAGGAGTAGCAAGGGTTGCAATTATGGACCTCCTAGCGAATGGCAGATTTACAATGCATTAGGTGGTAGTCATGGTGTTCCACGAGTTTATTTCAAGGGGCGGCAAAGTGATTACTATATTATGGTCATGGATATGCTTGGCCCTAGTCTATGGGATGTTTGGAATAACAACTCCCGAATGATGTCTGTAGAAATGGTGGCATGTATAGCAATTGAGGCTATCTCCATACTGGAGAAGATGCATTCTAGAGGATATGTGCATTGTGATGTAAAACCCGAGAACTTTTTGCTTGGTCCCCCTGGAACTCCTGATGAGAAGAAGTTATTTCTTGTTGATCTTGGATTAGCAACCCGCTGGCGTGATAGCTCGAATGGCCTTCATGTTGAGTATGATCAACGTCCAGATGTATTTAGGGGGACAGTTCGTTATGCTAGTGTGCATGCCCATCTTGGGAGAACAGGTAGCAGGAGAGATGATTTGGAATCTCTTGCTTACACGCTAATCTTCCTTCTTCGTGGACGGTTACCCTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCAGCAAGAAGAAGATGGCAACTTCCCCAGAAGTTTTGTGTTGCTTTTGTCCTCCACCTTTTCGGCAATTTGTTGAGTTTGTAGTGAATTTAAAGTTTGATGAAGAGCCAAATTATGCAAAATATATATCACTTTTCGATGGAATTGTTGGTCCCAATCCAGACATCAGGCCGATAAACACTGATGGTGCTCAGAAGCTTATATATCAGGTTGGACAGAAAAGAGGACGATTAACATTGGAGGGGGATGATGATCAACAACCAAAGAAGAAGGTCAGAATGGGAATACCAGCAACACAATGGATTAGTGTTTACAATGCTCGGCGACCAATGAAGCAAAGGTACCATTACAATGTTGCTGATATTCGGCTTCCCCAACACATTGAGAAGGGACTTGAAGATGGGTTATTTATAAGTGGTGTTGCCTGTTGCACTGACCTTTGGGCACTTATCATGGATGCTGGGACTGGTTTCACTGAACAAGTTTATGAACTCTCACCCTGCTTTCTTCACAAGGAATGGATTGTGGAACAGTGGGAAAAGAATTACTACATTAGTGCCATAGCTGGAGCTAATAATGGGAGCTCATTGGTTGTAATGTCGAAGGGGACCCAATACTTGCAACAATCCTATAAAGTCAGTGAGTCATTTCCATTCAAGTGGATCAATAAAAAACGGAAAGAAGGATTTTATGTCACTGCTATGGCTACTGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGGGCTGGATTTTCTGACCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGTATTCATAGAAGGTGGGAAAACGGTTACCGCATCACTGCAACTGCTGCTACAGGGGACCAAGCTGCTTTTGTCCTTAGTGTTCCAAGAAGAAAACCAGCTGACGAAACTCAGGAGACACTCCGCACATCTGCCTTTCCTAGTACTCATGTAAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTATGGGAGAACAGTTTCATAA 1827 0.4428 MNHDRDSAADIPPPAAVAADDEGTTTPIPEKVTVGGSPLYRIGRKLGKGGFGQVYVGHRVGVAKNSTDRTGPGAVEVALKFEHRSSKGCNYGPPSEWQIYNALGGSHGVPRVYFKGRQSDYYIMVMDMLGPSLWDVWNNNSRMMSVEMVACIAIEAISILEKMHSRGYVHCDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSNGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVSKKKMATSPEVLCCFCPPPFRQFVEFVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTLEGDDDQQPKKKVRMGIPATQWISVYNARRPMKQRYHYNVADIRLPQHIEKGLEDGLFISGVACCTDLWALIMDAGTGFTEQVYELSPCFLHKEWIVEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKRKEGFYVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWENGYRITATAATGDQAAFVLSVPRRKPADETQETLRTSAFPSTHVKEKWAKNLYIASICYGRTVS* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1010 608 PANTHER CASEIN KINASE-RELATED 17 582 - -
Lan10g1010 608 SUPERFAMILY Protein kinase-like (PK-like) 40 323 IPR011009 -
Lan10g1010 608 CDD STKc_CK1 40 317 - -
Lan10g1010 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lan10g1010 608 ProSiteProfiles Protein kinase domain profile. 40 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1010 608 Gene3D Transferase(Phosphotransferase) domain 1 18 341 - -
Lan10g1010 608 Pfam Protein kinase domain 40 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1010 608 SMART serkin_6 40 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1010 608 MobiDBLite consensus disorder prediction 1 32 - -
Lan10g1010 608 PANTHER - 17 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1010 Lan-Chr10 15340489 15344514 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1010 23 199 EF-hand Containing Proteins AT2G17890 30.526 1.09e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lan10g1010 Pkinase 7.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g1010 - - vvi:100254265 1113.98