Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g1006 ATGGAGAGGGTGGTTGGAGGAAAATATAAGATTGGTAGAAAAATTGGGAGTGGATCATTTGGTGAAATCTACATTGGTGCACATATCAACACCTATGAAATTGTGGCTGTAAAGATGGAGAGTAGAAAATCCAAACCTCCCTTACTACTATATGAGGCCAATGTATATAATATTCTTCAAGGAGGAAGTGGAATTCCAAGTTTGAAATGGTGTGGTAGTGATGGAGACAATAATGTTCTAGTTATTGAAATTCTTGGACCTAGTCTTGAAGACCTTTTTTACTATTGTGGGAAGAAATTTTCACTAAAAACAGTTCTCATCTTGGCTGATCAGATGCTTACAAGGATAGAGTATTTACATTCAAAGGGATTTTTGCATAGAGATATCAAACCAGATAACTTCCTTATGGGTCTTGGCAAGAAAGCAAATCAGGTTTTTATGATTGATTTTGGACTTGCAAAAAGATATAGGGACCCTTGTACAAATAAGCATATTCCTTGCAGAGAGAACAAAAACTTAACAGGGACTGTACGTTATGCAAGTTGCAATACTCACTCAGGAATTGAGCAAAGTCGTCGCGATGATTTGGAATCGCTTGGTTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTACAAGCTGCTACCACAGAGCAAAAATTTGACAAGATTTGCAAAAAGAAGTTATCAACTCCTGGTGAGATACTTTGCAAGTCATTTCCTGTGGAGTTTGCTTCTTACTTTCATTACTGCCGATCTTTGTCATTTGATCAACGACCAGATTACGGATTCCTGAAGCGACTGTTTCGCGATTTGTTCACTCGTGAAGGATATGATTCTGACAATTTATTTGACTGGACCATCCTAAAGCAACAGCAGATGCAACAGAGAAAGACACAAAATCAATTTACTGCTCCAGTTGCTGTTCCTAGCAATCTAGAACCAGTGGATGTGGATAAGCACAAAGGACTCAATGATTCCACTCCGATTCCCATGGCAAGACCGTCGACGAATATTGATCGTCCACGTGTTTCTATGAAGATCATGGCATCTAATGTCCAGAATCTTAATGTCAAGTTTCCAACAGAGAAATATATTATGAACAATGGTTCATCTAATTTGACTCCAATGCCCAGAATCTCTACTGAAAATATTGCCATGCCAAGAATCTCTACCGAAAATATCGTCATGCCGAGGGTCTCAAAACCTGAAAGGCTCATTGGAAACCCAAATCCTGATGCATCAAGCAGTTCTGTTCCTGCACTACGCCGAGCTTCTTCGATCAAATAG 1302 0.3925 MERVVGGKYKIGRKIGSGSFGEIYIGAHINTYEIVAVKMESRKSKPPLLLYEANVYNILQGGSGIPSLKWCGSDGDNNVLVIEILGPSLEDLFYYCGKKFSLKTVLILADQMLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVFMIDFGLAKRYRDPCTNKHIPCRENKNLTGTVRYASCNTHSGIEQSRRDDLESLGYVLMYFLRGSLPWQGLQAATTEQKFDKICKKKLSTPGEILCKSFPVEFASYFHYCRSLSFDQRPDYGFLKRLFRDLFTREGYDSDNLFDWTILKQQQMQQRKTQNQFTAPVAVPSNLEPVDVDKHKGLNDSTPIPMARPSTNIDRPRVSMKIMASNVQNLNVKFPTEKYIMNNGSSNLTPMPRISTENIAMPRISTENIVMPRVSKPERLIGNPNPDASSSSVPALRRASSIK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g1006 433 PANTHER CASEIN KINASE-RELATED 1 397 - -
Lan10g1006 433 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Lan10g1006 433 MobiDBLite consensus disorder prediction 406 433 - -
Lan10g1006 433 MobiDBLite consensus disorder prediction 414 433 - -
Lan10g1006 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Lan10g1006 433 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 397 - -
Lan10g1006 433 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Lan10g1006 433 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1006 433 Pfam Protein kinase domain 9 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan10g1006 433 Gene3D Transferase(Phosphotransferase) domain 1 1 327 - -
Lan10g1006 433 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g1006 Lan-Chr10 15301499 15309127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g1006 11 267 MAP Kinase Kinase Kinase AT1G62400 29.137 1.39e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Lan10g1006 Pkinase 6.4e-27 CL0016