Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0990 ATGGCAGGGTTAAGATGCAACGCTTGTAACAAAGAATTCAATGATGATTTTGATCAAAAGGATCATTACAAGTCTGAGTGGCATCGCTACAATCTCAAGCGCAAGGTGGCTGGAGTTCCCGGGGTGACAGAAGCACTATTTATGGCTAGACAATCTGCACTTGCTCTAGAGAACAACAAATCAAGTGCAACCCCTATGCTTTATAGCTGTGGCCTTTGTGGAAAGGGATATAAGAGTTCTAAGGCTCATGCCGAGCATCTTAAATCTCGTGGTCATATAGTGCGAGCTTCTGAAGGAAATCATTCAGATGAGAATGCAATAATCAAGCCGCTTCAACAACGTTTTGTGAATAGGCATCCTCCTAGAAGGGAGGTGGTGGATAACTCTGAAGAAGAAGATGAAGAAAGTGAAGATGAGTGGGTGGAGGCTGACCCTGAAGAGGATTTGATTAATGATGCTGCGAAATCTTTGAATGATTTGAATGTCAATGAGAATGATGATATGGATGAAGAAGACGATGATAGTTTTGAGGAGTTGGATCCATCGTGTTGCTTTATGTGTGATCGAGAGCTCAAAACAATAGAAAGCTGCATGGTTCACATGCACAAGCACCATGGATTCTTTATTCCGGATGTTGAGTATTTGAAGGATCCAAAAGGGCTTCTCACTTATCTTGGCCTTAAGGTCAAAAGGGATTACATTTGTCTGTACTGCAACGATAGATGTTATCCTTTCAGCAGCTTGGAAGCAGTCAGGAAACATATGGTAGCAAAAGGTCACTGTAAAGTGCATTACGGTGACGACGATGATGAAGAGGAAGTAGAGTTGGAAGAATTCTATGATTACAGCAGCAGTTATGTGGATGAACAAGGCAAGCAACTGGTTGCGTCAGGTGACTTGGCTAACAACGTTGAACTTGGTAGTGCTGGGTCTGAGCTCATAATCACTAGGAGGTCTGATGATAGAGTATCAACCAGAACACTTGGTTCCCGTGAATTTTTGCGTTATTATCGTCAGAAACCTCGTCCTTCTCCAACTAATAATGTAGCCATCACTGCTGCATTGGCTTCAAGGTACAGAAGCATGGGTTTGGCCACAGTTCAATCAAGGGAGCAGATGGTGAGGATGAAGGTCCTGAAGGAAATGAGTAGGACCGGTGTGGAGATTATGCGCAGCAAGATGGGGATGAAGAGTAATGTCATTCGGAACCTTCCGAAGAATTGCACCTATTAG 1233 0.4339 MAGLRCNACNKEFNDDFDQKDHYKSEWHRYNLKRKVAGVPGVTEALFMARQSALALENNKSSATPMLYSCGLCGKGYKSSKAHAEHLKSRGHIVRASEGNHSDENAIIKPLQQRFVNRHPPRREVVDNSEEEDEESEDEWVEADPEEDLINDAAKSLNDLNVNENDDMDEEDDDSFEELDPSCCFMCDRELKTIESCMVHMHKHHGFFIPDVEYLKDPKGLLTYLGLKVKRDYICLYCNDRCYPFSSLEAVRKHMVAKGHCKVHYGDDDDEEEVELEEFYDYSSSYVDEQGKQLVASGDLANNVELGSAGSELIITRRSDDRVSTRTLGSREFLRYYRQKPRPSPTNNVAITAALASRYRSMGLATVQSREQMVRMKVLKEMSRTGVEIMRSKMGMKSNVIRNLPKNCTY* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0990 410 MobiDBLite consensus disorder prediction 118 146 - -
Lan10g0990 410 PANTHER ZINC FINGER PROTEIN 622 1 410 IPR040025 -
Lan10g0990 410 PANTHER ZINC FINGER PROTEIN-RELATED 1 410 - -
Lan10g0990 410 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Lan10g0990 410 SUPERFAMILY beta-beta-alpha zinc fingers 4 36 IPR036236 -
Lan10g0990 410 SUPERFAMILY beta-beta-alpha zinc fingers 169 243 IPR036236 -
Lan10g0990 410 Pfam Zinc-finger of C2H2 type 68 92 - -
Lan10g0990 410 Pfam C2H2 type zinc-finger (2 copies) 184 285 IPR041661 -
Lan10g0990 410 SMART ZnF_U1_5 1 35 IPR003604 GO:0003676|GO:0008270
Lan10g0990 410 MobiDBLite consensus disorder prediction 128 146 - -
Lan10g0990 410 SMART c2h2final6 4 28 IPR013087 -
Lan10g0990 410 SMART c2h2final6 68 92 IPR013087 -
Lan10g0990 410 SMART c2h2final6 182 204 IPR013087 -
Lan10g0990 410 SMART c2h2final6 233 260 IPR013087 -
Lan10g0990 410 ProSitePatterns Zinc finger C2H2 type domain signature. 70 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0990 Lan-Chr10 14958319 14961077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0990 1 410 C2H2 Transcription Factor Family AT4G31420 62.919 2.20e-177 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan10g0990 zf-C2H2_2 1.1e-25 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0990 K14816 - gmx:100796317 607.446