Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0988 ATGTTTTCCGGCTCCCAATTCGACGCCACCACCGCTTTCTCTGGCGGCGGATTCGTATCCTCTCAATCTACTGAGCTCAACGATTCATCTCCCGCTCACTCCAGAAGCCGTGAAAGTCATGGTTTGGTTCCAGTGACGGTGAAGCAGATAAGTGAAGCTTCTCATTCTGGTGATGAAAAATCAAGTTTTGTTATCAACGGTGTAGATCTCAATAATGTAACCTTGGTTGGAATGGTGTTCGATAAAGTTGAGAGAAACACCGATGTTAATTTTGTTTTAGATGATGGAACAGGGCGAATCAAATGCCGAAGATGGGTCAATGAGACATTTGACTCAAAGGAAATGGAAGAAATACAGGATGGTATCTATGTTCGTGTTTATGGGCATTTGAAGAGTTTCCAAGGTGTAAGGCAACTTGTTGCCTTTTCTGTCAGGCCTGTGACGAATTTTGATGAGATCTCTTTTCACTTCATCGACTGCATTCATAACCACCTCCGCACCAAATTAAAGGTTGAAGGAATCACTCAAGCACATCCTGACTCATCTTTTAACACCCCTGTCAGAAATGCATCAAATGTATCTCAGGCACCATCATCAATTCCAGCATATGCACAATATAGTGTGGATGGACTCAAAGATTGTGATAAACTGGTTATAGAATATATGCAGCAGCACTCAGACATGTCAGATGAACGGGGAATACACGTCGATGAATTATCTCGAGAACTTAAGCTTCCATTGGACAAGATCATGTTGTCGCTGAGGACTCTTGGAGATGATGGTTTAGTATATTCCACCATAGATGACTTCCATTACAAGCAAGCTTGA 828 0.4227 MFSGSQFDATTAFSGGGFVSSQSTELNDSSPAHSRSRESHGLVPVTVKQISEASHSGDEKSSFVINGVDLNNVTLVGMVFDKVERNTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEIQDGIYVRVYGHLKSFQGVRQLVAFSVRPVTNFDEISFHFIDCIHNHLRTKLKVEGITQAHPDSSFNTPVRNASNVSQAPSSIPAYAQYSVDGLKDCDKLVIEYMQQHSDMSDERGIHVDELSRELKLPLDKIMLSLRTLGDDGLVYSTIDDFHYKQA* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0988 275 PANTHER REPLICATION PROTEIN A-RELATED 1 275 IPR040260 -
Lan10g0988 275 Pfam Replication protein A C terminal 174 269 IPR014892 -
Lan10g0988 275 CDD RPA2_DBD_D 72 165 - -
Lan10g0988 275 PIRSF RPA32 1 275 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lan10g0988 275 Pfam OB-fold nucleic acid binding domain 73 145 IPR004365 GO:0003676
Lan10g0988 275 Gene3D - 205 275 IPR036388 -
Lan10g0988 275 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 275 - -
Lan10g0988 275 SUPERFAMILY Nucleic acid-binding proteins 42 166 IPR012340 -
Lan10g0988 275 SUPERFAMILY "Winged helix" DNA-binding domain 209 273 IPR036390 -
Lan10g0988 275 MobiDBLite consensus disorder prediction 19 41 - -
Lan10g0988 275 Gene3D - 38 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0988 Lan-Chr10 14946825 14950768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0988 1 273 Core DNA Replication Machinery Family AT2G24490 47.857 1.97e-92 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0988 K10739 - gmx:100802512 443.351