Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0969 ATGGCAAAGAAGGAGGCTCCCCTGGTGTTTATGGATGTGTCCATAGATGGGAGTCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTATGACATCGCTCCAAAGACTGCAGAAAACTTCCGTGCACTATGCACAGGAGAAAAGGGAGTCAGTCCAAACACTGGAAAACCGCTGCACTACAAGGGTTCTTTCTTCCATCACATTGTAAAAGGGTCCATTGTGCAGGGTGGTGATTTTGTCAATCGAAACGGGGCTGGTGGAGAAAGCATATATGGTTCTAAATTTCCAGATGAGTCACCTAGGCTAAAACATGATGCTACAGGCCTTTTATCCATGCCAGTTGCTAATCGTGACATTCTTGGTTCTCATTTTATCATCACTTTGAAAGCTGATCACAATCTTGATAGGAAGAATGTAGTCTTTGGCAAGCTTGTGCAAGGTCTTAACTTATTGAAGAAAATTGAAGATGTGGGTGATGAAGGAGGACATCCAACCGTGACTGTTAAAATAATTAATTGCGGTGAATATACCGAGTATGGGAAGAGGGTATATAAATCAAAAATAGGAAAGCATGGATCCTCTGGAGCTAATAGTCTTGAAGCTCGACGGAAGGGAAAGCAGAAAAAATCAAGAGACAGAAGGAAAAAGAGAAAATACTACTCTTCTGAATCGGAGAGTTCTTCAGATTCAGATACAGAATCTTCAGAAAGTGATAGTGATTCTGATTCAGACACATCTTCATCAACTTACACAAGTTCGTCTGGGGCTGACAAGCGAAGGAAGAGAAAGAGATCTAGGAAAGATAAAAATAGACATGGAAAAAGAAGAGATAAACGCCGCGACAAAAGGCGAAGGAAACATGATAAGAAATCAAAGCGTATATCAAAAAGGGAATCAGGCAGTCTTATTGATTCAGATGGTGGAAGTAAGGGTGACAATAGCTCTGATAGCAAAAGTCTCAATGCTCAATTGAAAGATCAGAAGAATAAGGATCAATCTCCTAAAAATGCTGAATTTCAGTTTCCCTTAGTTGTGGAAAAAGAGGTTCGTCCCATGCATGATAAAAAGAGAGAGGAAGTGAGTATGCTAGAGATGGAAGAACTCCCTAAGGAAAATGGAGGGCGGCGTAGCAATGGTGTTGCAGCCAACTATAGATCTGACAGAAGTGAAGAGAGGCAGCATGACACGATGGATGATCATCCAGACAAATTTAGGAGCCGAAGCACGAGTCCTAAGCGACCCATGAGTAAGAGTAAGAGTAATAGTCCCAGGCGTGAGAGCAAGAGCACAAGCGTAAGTCCAAAAAGGATGTTGAGCCAAAGTCCAAGTATTGGTGGTAGAAGTCCCCATGCTCCATCAAGAAGAAGCATCAGCAGGAGTCCTGTTAGAAGCATCGGCAGGAGCCCAGTGAGGAGCAGGAAGAGGATAAGTGTCAGTAGAAGCCCAGTTATAAGTCATGATCGTCGAAGTGTCAGAAGCCCAGTGAGAACTCGCAATCGTACAAGTCTAAGTAGAAGCCCTGTGAAAAGTCGCGATGATAGAAGTGGCAGCAGGAGCCTTGTAAGATCCCTTTCTCAAAGCCGCCAGAACAGAAGTTCTCCCAGAGCATCATCAAGAAGAATGGTCAGCAGAAGCCCTGTAAGAGAGTCAAGAAATAGTGTAAGCAGGAGTCCAGTCAGACCATCTGCCAGAAGCTTTAGCAGAAGCATTAGCCGAAGTCCAGCCAGAGCGCCAGGCAGAAGCAATCGCCGCAGTTATTCTAGGAGCCGTAGCCCTGTTCGTAGAGTAAGGACACCTAGTAGGAGTGTGTCACCTAATGCTTCACCAAAGCGGATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCTTATGCTAGAAGGTATAAAACTCCCTCCCGTTCTCCTGTGAGATCGTACCGCTTTAACGGAAGAGGTGACCGTGACAGATATTCAGCATACAGAAGATACTCCCCCAGGCGTTACAGGAGCCCACCACCACGGAGAAGAACTTCACCAAGGTACCAAAGCAGGAAGAGCAGGACGCCATCTGTATCACCCAGCCCACGTTACCGTGCTCAAAGATATAGCCGAAGCCGTAGCCCAGTTCGCAGTCGATCGCCTGTGGAGCCACGTCGACCTCTGTCTAAAAGCAGGAGCCTGTCACGATCTCGATCTCGATCAAAATCTTCACAGGAAGCACAATCTCCACATAAAGTGATCCGAGATAACAGGTCAAGGTCATCATCTGGAAGCCCAAACGGACGGAAAGGCCTGGTCTCATATGGAGATGGTTCTCCGGACTCTGGCTAA 2307 0.456 MAKKEAPLVFMDVSIDGSPVERMVFELFYDIAPKTAENFRALCTGEKGVSPNTGKPLHYKGSFFHHIVKGSIVQGGDFVNRNGAGGESIYGSKFPDESPRLKHDATGLLSMPVANRDILGSHFIITLKADHNLDRKNVVFGKLVQGLNLLKKIEDVGDEGGHPTVTVKIINCGEYTEYGKRVYKSKIGKHGSSGANSLEARRKGKQKKSRDRRKKRKYYSSESESSSDSDTESSESDSDSDSDTSSSTYTSSSGADKRRKRKRSRKDKNRHGKRRDKRRDKRRRKHDKKSKRISKRESGSLIDSDGGSKGDNSSDSKSLNAQLKDQKNKDQSPKNAEFQFPLVVEKEVRPMHDKKREEVSMLEMEELPKENGGRRSNGVAANYRSDRSEERQHDTMDDHPDKFRSRSTSPKRPMSKSKSNSPRRESKSTSVSPKRMLSQSPSIGGRSPHAPSRRSISRSPVRSIGRSPVRSRKRISVSRSPVISHDRRSVRSPVRTRNRTSLSRSPVKSRDDRSGSRSLVRSLSQSRQNRSSPRASSRRMVSRSPVRESRNSVSRSPVRPSARSFSRSISRSPARAPGRSNRRSYSRSRSPVRRVRTPSRSVSPNASPKRIRRGRGFSERYSYARRYKTPSRSPVRSYRFNGRGDRDRYSAYRRYSPRRYRSPPPRRRTSPRYQSRKSRTPSVSPSPRYRAQRYSRSRSPVRSRSPVEPRRPLSKSRSLSRSRSRSKSSQEAQSPHKVIRDNRSRSSSGSPNGRKGLVSYGDGSPDSG* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0969 768 MobiDBLite consensus disorder prediction 479 493 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 187 768 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 518 539 - -
Lan10g0969 768 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Lan10g0969 768 MobiDBLite consensus disorder prediction 305 321 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 612 626 - -
Lan10g0969 768 SUPERFAMILY Cyclophilin-like 6 177 IPR029000 -
Lan10g0969 768 MobiDBLite consensus disorder prediction 424 464 - -
Lan10g0969 768 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Lan10g0969 768 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Lan10g0969 768 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Lan10g0969 768 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Lan10g0969 768 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP95 1 380 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 346 372 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 546 585 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 675 702 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 639 654 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 256 292 - -
Lan10g0969 768 MobiDBLite consensus disorder prediction 659 674 - -
Lan10g0969 768 Gene3D - 1 175 IPR029000 -
Lan10g0969 768 MobiDBLite consensus disorder prediction 384 408 - -
Lan10g0969 768 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Lan10g0969 768 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0969 Lan-Chr10 14652817 14659663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0969 25 170 U-box Gene Family AT5G67530 38.514 1.40e-18 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0969 K09566 - qsu:112027169 540.806